Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1140 ATGCAAGATTTGTTGAGCTATAATTCAGGGTCAATAAGAATCACTCTTATGGTCAGGTTAAGTACAGTTTGGGGTGAGGTAGGGTTCTTTGGGTTCAAGCGAGTGAAGATGGTGAAGATAGCATTTGGAAGTGTGGGTGATTCGTTTAGCCTGGCTTCCTTCAAGGCTTACCTAGCAGAGTTCATTGCTACTCTTCTCTTTGTGTTCGCTGGCGTTGGATCAGCCATCGCTTACGGGAAGCTTACGTCGGACGCAGCCTTAGATCCGCCGGGGCTGGTGGCGGTGGCGGTGGCCCACGCATTTGCCTTGTTCGTCGGCGTAGCTGTGGCAGCCAACATCTCAGGTGGCCACCTGAATCCAGCTGTCACTCTCGGATTGGCTGTTGGAGGCAACATCACCATCCTAACTGGCATATTGTACTGGATTCACCAATTGCTGGGCTCTATTGTTGCCTGCCTCCTCCTCAAATTTGTCACCGGCAAAAGCATTCCAACACATGGGCTTGCTGCAGGGGTGGGCGCAGCTGAAGGTGTAGTGTTTGAAATCGTTGCTACATTTGCATTAGTTTACACCGTCTACGCCACTGCGGCGGACCCCAAAAAGGGCTCACTCGGCATCATTGGACCCATTGCTATTGGGTTCATTGTGGGTGCCAACATTTTAGCCGCTGGCCCATTTAGTGGTGGTTCCATGAACCCGGCTCGATCATTCGGCCCGGCCGTGGTAAGTGGGTCCTTTGTGGATAATTGGATCTATTGGGTCGGCCCATTGATCGGTGGCGGTTTGGCCGGGTTCGTTTATGGTGACATTTTCATTGGTTCATATGCCCCGGTTCCTGCTGCTGAAAACTATCCTTAA 858 0.5163 MQDLLSYNSGSIRITLMVRLSTVWGEVGFFGFKRVKMVKIAFGSVGDSFSLASFKAYLAEFIATLLFVFAGVGSAIAYGKLTSDAALDPPGLVAVAVAHAFALFVGVAVAANISGGHLNPAVTLGLAVGGNITILTGILYWIHQLLGSIVACLLLKFVTGKSIPTHGLAAGVGAAEGVVFEIVATFALVYTVYATAADPKKGSLGIIGPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGSFVDNWIYWVGPLIGGGLAGFVYGDIFIGSYAPVPAAENYP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1140 285 ProSitePatterns MIP family signature. 117 125 IPR022357 -
Bisa11g1140 285 Pfam Major intrinsic protein 51 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 FunFam Probable aquaporin TIP1-1 38 283 - -
Bisa11g1140 285 PANTHER AQUAPORIN-8 40 273 IPR034294 -
Bisa11g1140 285 NCBIfam MIP family channel protein 59 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 SUPERFAMILY Aquaporin-like 51 273 IPR023271 -
Bisa11g1140 285 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 PRINTS Major intrinsic protein family signature 180 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 PRINTS Major intrinsic protein family signature 136 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 PRINTS Major intrinsic protein family signature 99 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g1140 285 Gene3D Glycerol uptake facilitator protein. 38 277 IPR023271 -
Bisa11g1140 285 CDD MIP 55 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1140 Bisa-ChrBisa11 29561981 29566362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1140 37 282 Major Intrinsic Protein MIP AT5G47450 80.567 8.92e-138 387