Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1126 ATGGCTCCAGATTTATGTACTCGGATAAACACTAGATTGCTTTCTAGTTTCACTTTCTATGACGTGTATTCTCACATCTATTCTTTGCGCCCCTCCCATGTTTGCAACAATGAAGACCATATGGGTCGAGTTCCAACGTTCGAAAAATTTTGTGGGCTTTCTGAAAATGTAACGACTGGGGCCCACTTGTCTGGGGACCAAAAGGATAAAGTGGCTAGCGAATCCTACTTCAGACATTCTCTTCCTCGCTCCTCTCTAATGGCTTCTCTCTTTGTTGTTTGGGTCTCCTTATTGTTTCATGCACTAACAGTTACATGTACCACCTACCACGATGGCGCACCAACACCATCATCAATGTCTTCCACAAACTCGTCCAAGCACTACCACAGGTGGGTGGGGCCCATCGGCCAACGCGTAATCACCGTCGACGTGAACGGCACCGGCCAGTTCCAGTCCGTCCAAGCCGCCGTCAATGCTGTCCCAGACAACAACTGTATGAACGTCCTCATTCAAATTAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCTGTGACGAAGCCTTACATAACGTTTCAGGGGGCAGGGAGAGATGTGACGGTGATAGAATGGCACGACAGAGCCAGTGACCCTGGCCCTAATGGACAGCAACTTCGTACTTATAGAACAGCTTCAGTTACTGTCTTTGCCAACTATTTCTCTGCTAGGAATATCAGCTTCAAGAACACAGCGCCGGCACCGATGCCGGGAATGCAGGGGTGGCAAGCGGTGGCGTTTAGGATATCCGGCGACAAGGCATATTTCTCAGGCTGTGGCTTCTACGGTGCACAGGACACACTCTGCGACGACGCCGGCCGTCATTATTTCAAGGATTGCTATATTGAGGGCTCCATTGATTTCATCTTCGGGAATGGCAGGTCCATGTACAAGGATTGTGAGCTGCACTCAATAGCGACGAGGTTTGGGTCGATAGCAGCCCACGATAGGAAACACCCATACGAGAAGACGGGTTTCGCATTCGTAGGGTGCAGGGTGACGGGTACAGGCTCGCTCTATGTGGGCCGGGCAATGGGCCAGTACTCGAGGATCGTCTACGCTTATACATACTTCGATGACATCGTAGCACATTGGGGTTGGGACGATTGGAACCATGCAGACAACAAAAACAAGACTGTGTTCTTCGGAGTGTACAAGTGCTGGGGCCCAGGGGCGGAGGCGGTGCGTGGGGTCTCGTGGGCCCGAGAGCTGGACTTCGAATCGGCCCATCCATTTCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATCGCACCTTCTGATGCTTAG 1326 0.5143 MAPDLCTRINTRLLSSFTFYDVYSHIYSLRPSHVCNNEDHMGRVPTFEKFCGLSENVTTGAHLSGDQKDKVASESYFRHSLPRSSLMASLFVVWVSLLFHALTVTCTTYHDGAPTPSSMSSTNSSKHYHRWVGPIGQRVITVDVNGTGQFQSVQAAVNAVPDNNCMNVLIQISAGYYIEKVVVPVTKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKHPYEKTGFAFVGCRVTGTGSLYVGRAMGQYSRIVYAYTYFDDIVAHWGWDDWNHADNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFESAHPFLVKSFVNGRHWIAPSDA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1126 441 Gene3D - 136 440 IPR012334 -
Bisa11g1126 441 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 135 437 - -
Bisa11g1126 441 FunFam Pectinesterase 136 438 - -
Bisa11g1126 441 Pfam Pectinesterase 140 432 IPR000070 GO:0030599|GO:0042545
Bisa11g1126 441 ProSitePatterns Pectinesterase signature 2. 294 303 IPR033131 -
Bisa11g1126 441 SUPERFAMILY Pectin lyase-like 137 438 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1126 Bisa-ChrBisa11 29230437 29235818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1126 97 441 Carbohydrate Esterase AT5G47500 75.723 0.0 550