Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1095 ATGGACTTGAAGTCGTCTCATGTTTCTCCTGTTCTAACTGACCCTGTCCCTGTCAACAAGTCAAGACTAGGAATGCCTTCTGGTATGTTAAGTTACTCCCAACAAGATCCACCACCCCCCACTCCCGCTAAATATACAAAAAGCGGTTCAAGGAAGAGTGTAGTTAGTCTTGATGATGTTCGCTTCAATGGATGGCTTGACTCCATGGAGGCCTCTTCACCCCCGAGGAAGAAGGTTGTTAAGGGTGCTAATAACACCCTGGTCTATGACTCTGACAGTGAGGATTATTACTCCTGGATGCTTGATTTCCCATCCGCACTAGACTCTTTTGACAACATTACTGACCGTGCCAGGAATAAGAAGATTGTAGTGTTTCTAGATTATGATGGAACGCTTTCCCCAATAGTAGATGATCCTGACTCTGCCTTTATGTCCGAAGCTATGCGTGCAACAGTACGAAGTGTGGCAAAGTTTTTTCCCACCGCAATCATTAGTGGAAGAAGCCGTGACATGGTTTTTGATTTAGTAAAATTAACGGAACTCTACTATGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTCAGTGAGACTCTGCCCAATAACCATCCAAACTGTGTCAGATCTAATGACCGTGAGGGAAAGGAGATAACTCTGTTTCAACCTGCAAAAGAATTCCTGCCTATGATCGATGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGATATCAAAGGCGCAAAGGTTGAAAACCACAAGTTTTGCGTCTCTATACATTACCGTAAAGTAGATGAGAATAATTGGATAACCGTTGGACAGCTCGTCCATGACATGTTACAGAATTACCCGCGTCTATGTTCAACTCACGGACGCAAGGTTTTAGAGGTCCGTCCAGTGATTGATTGGAACAAAGGAAAAGCAGTCGAGTTTTTACTTGAGTCTCTAGGGTTAACTAATAGGGACGACGTGCTTCCCATCTACATTGGAGATGATAAGACAGACGAAGATGCATTCAAGGTGTTGCGGGAGAGCAATCGAGGCTATGGGATATTGGTTTCGTCTGTCAGGAAAGAAAGCAATGCCTTGTTCTCTCTCAGGGACCCATCTGAGGTCATGAAGTTTCTGCAGCTTCTGGTGAACTGGAAGAGGCAACAAGGAAGCACGCACTAG 1170 0.4462 MDLKSSHVSPVLTDPVPVNKSRLGMPSGMLSYSQQDPPPPTPAKYTKSGSRKSVVSLDDVRFNGWLDSMEASSPPRKKVVKGANNTLVYDSDSEDYYSWMLDFPSALDSFDNITDRARNKKIVVFLDYDGTLSPIVDDPDSAFMSEAMRATVRSVAKFFPTAIISGRSRDMVFDLVKLTELYYAGSHGMDIIGPVSETLPNNHPNCVRSNDREGKEITLFQPAKEFLPMIDEVFRTLVEITKDIKGAKVENHKFCVSIHYRKVDENNWITVGQLVHDMLQNYPRLCSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTNRDDVLPIYIGDDKTDEDAFKVLRESNRGYGILVSSVRKESNALFSLRDPSEVMKFLQLLVNWKRQQGSTH 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1095 389 NCBIfam trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Bisa11g1095 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 43 386 IPR044651 GO:0004805|GO:0005992
Bisa11g1095 389 Pfam Trehalose-phosphatase 125 369 IPR003337 GO:0003824|GO:0005992
Bisa11g1095 389 FunFam Trehalose 6-phosphate phosphatase 229 388 - -
Bisa11g1095 389 FunFam Trehalose 6-phosphate phosphatase 223 299 - -
Bisa11g1095 389 SUPERFAMILY HAD-like 123 383 IPR036412 -
Bisa11g1095 389 MobiDBLite consensus disorder prediction 1 50 - -
Bisa11g1095 389 CDD HAD_TPP 123 373 - -
Bisa11g1095 389 Gene3D - 221 389 IPR023214 -
Bisa11g1095 389 Gene3D - 122 205 IPR023214 -
Bisa11g1095 389 NCBIfam HAD-IIB family hydrolase 124 342 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1095 Bisa-ChrBisa11 28658223 28660225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1095 118 378 Trehalose Biosynthesis Gene Families AT1G70290 25.993 1.87e-09 57.8