Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1092 ATGTCATCCTCTTCTACTACCTTACCGCTGGACCACCTCCCTCCTTCCGAGCAGCTTTGTTATGTCCAATGTAACATTTGTGACACTGTCCTCGCTGTAAGTGTTCCTTGCACGAGCTTGTTCAAGACGGTGACTGTGCGATGCGGGCACTGCACGAACCTCCTGCCAGTGAATGTGCGTGGATTGCTTCTGCCATCCTCCAACCAATTCTATTTGGGTCACTCTTTCTACACTCCGTCTCATAATCTTCCGGAGGAGATTCCGAACCCGTCCCCAAATTTGTTGATCAATCAGACCAACTCATCCAATGACTTCTCTATGCCTTCCAGAACTGCACGCCCTGATGAGCTACCACGCCCACCCATCATCAATAGACCTCCAGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGACATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAACTGGGCCCACTTCCCCCACATCCACTTTGGTCTCATGCCTGATCAGACTGCGAAGAAGACAAACGTGCGCCAGCAGGAAGGAGAGGACGTTCACAATCACATGAAAGATGGGTTTTTTGCTTCTGCAAATGTTGGTGTTACTCGCTACTAA 651 0.5069 MSSSSTTLPLDHLPPSEQLCYVQCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNVRGLLLPSSNQFYLGHSFYTPSHNLPEEIPNPSPNLLINQTNSSNDFSMPSRTARPDELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTAKKTNVRQQEGEDVHNHMKDGFFASANVGVTRY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1092 216 PANTHER PROTEIN YABBY 6-RELATED 1 190 IPR006780 GO:0007275
Bisa11g1092 216 Pfam YABBY protein 15 178 IPR006780 GO:0007275
Bisa11g1092 216 FunFam Axial regulator YABBY 123 194 - -
Bisa11g1092 216 Gene3D High mobility group box domain 123 203 IPR036910 -
Bisa11g1092 216 SUPERFAMILY HMG-box 122 171 IPR036910 -
Bisa11g1092 216 CDD HMG-box_SF 132 168 - -
Bisa11g1092 216 MobiDBLite consensus disorder prediction 91 109 - -
Bisa11g1092 216 MobiDBLite consensus disorder prediction 83 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1092 Bisa-ChrBisa11 28591526 28593834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1092 26 214 C2C2-YABBY Transcription Factor Family AT4G00180 58.571 3.75e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa11g1092 YABBY 9e-70 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1092 11 28591526 28593834 Bisa11g1092 11 28591526 28593834 ECH