Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1090 ATGAATACGTTTTCGCATGTTCCTCCAGGCTTTCGGTTCCATCCCACAGATGAAGAACTTGTTGATTACTACCTCAGAAAAAAGATAGCCTCTAAAAGGATCGATCTAGACATTATTAAAGACGTGGATCTATATAAAATTGAGCCATGGGATATTCAAGAACTATGCAAAACAGGAGCGGAAGAACAAAATGAATGGTATTTCTTCAGCCACAAAGACAAGAAGTACCCAACAGGAACTCGCACGAATAGAGCCACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGATAAGGCAATCTACCGTAGGAATTGCCTGATTGGGATGAGAAAGACTCTTGTATACTACAAAGGACGAGCCCCCAATGGCCAGAAGTCTGACTGGATCATGCATGAATACCGACTTGAAACTAATGAAAATGCAACTCCTCTGGAAGAAGGGTGGGTTGCGTGTAGAGTGTTCAAGAAGCGAATGACAAGTATGAGGAAGATGGGGGAGTATGAATCAACTTGCTGGTTTGACGACCAAGTGTCGTTCATGCAAGAGCTTGAATCTGCAAGGCCAATGTCTCAGTCTCAGTCTCAGTCTCACCCTTACTCATCGAATTACCACCACCATCACTACGTACCTAACAAGCAGGACCCACAATTGCAGTACAACATGCCCCATCCCCATGGGCATGACGCCTTCCTTCAACTTCCACATCTTGAAAGCCCAAGACTTCCTCATTCAGCCACCAGTTTGAGCTGCAATTCCATTGTCCCTTATGCCTATGACAGCAACACCAGTGGAAGTACCTTGCACTCTCCTTCACTGACTCAAGAAGATAACATACCCCATTCTCTTTATGGAAACAATGATCAAGTCACTGATTGGCGAGTTCTTCACAAATTTGTGGCTTCTCAACTCAGCAGTCCAAGTCAACACCAAGATGCTTCCAAGGAAACAAGTTATTGCGATACAGGAGCAGTCCACGTGGATGAGCAGACTACCATGGTAGCAAACGAATCTCAGAGGCCAGAAATTGGACAGCAGGAATATGCCTCCACATCTACCTCCAGTTGTCAGATTGACCTGTGGAACTGA 1086 0.4503 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDIIKDVDLYKIEPWDIQELCKTGAEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYRRNCLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLETNENATPLEEGWVACRVFKKRMTSMRKMGEYESTCWFDDQVSFMQELESARPMSQSQSQSHPYSSNYHHHHYVPNKQDPQLQYNMPHPHGHDAFLQLPHLESPRLPHSATSLSCNSIVPYAYDSNTSGSTLHSPSLTQEDNIPHSLYGNNDQVTDWRVLHKFVASQLSSPSQHQDASKETSYCDTGAVHVDEQTTMVANESQRPEIGQQEYASTSTSSCQIDLWN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1090 361 MobiDBLite consensus disorder prediction 334 361 - -
Bisa11g1090 361 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Bisa11g1090 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 260 - -
Bisa11g1090 361 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Bisa11g1090 361 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Bisa11g1090 361 FunFam NAC domain-containing protein 16 160 - -
Bisa11g1090 361 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1090 Bisa-ChrBisa11 28520076 28521759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1090 1 360 NAC Transcription Factor Family AT1G12260 54.762 3.24e-131 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa11g1090 NAM 1.8e-37 No_clan