Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1086 ATGGGGAGGCAACCTTGCTGTGACAAACTAGGCGTCAAGAAAGGACCTTGGACTGCCGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGCCAGTGCTGCTGGCGCGCCGTCCCCAAGCTCGCCGGCCTCCGCCGATGCGGCAAGAGTTGCCGCCTCCGTTGGACCAACTATCTCCGCCCTGACTTGAAGCGTGGACTCCTCACTGAATCTGAAGAACAGCTCGTCATCGACCTCCATGCCCGCCTTGGCAACAGGTGGTCCAAGATTGCTGCTAGATTACCAGGCAGGACAGACAATGAGATTAAGAATCACTGGAACACCCACATCAAGAAAAAGCTGCTTAAGATGGGAATTGATCCTGTTACACACGAGCCTCTTGATAAACAAGCTGCCTCCCACGAAACTTCTTCTTCTTCTCCTCCTCCTCCTCCACAGAGTATCCCAGGAAATAACCATGAGCTTAAGCAAACCGATGGGGTTCAGAACGCAGAGGACAACTCAAGCTTATCCCCTGCTGAAAACTCCTCTTCTGGGGACGAATCCCTTCTTCTGGATAGCATTTGCAGCGATGAATCCCTAATGAACAGCTTGTGGCTGGACGACACGCCTCTAATGGATGCATTATGGGACAGTGAACCTAAAGTACAGAACAATAATAATGACATGGGCTTGCCGTCTTGGGAGGATAATTGTGCCTGGTTTTTGGACTGTCAGGACTTTGGTGTTCATGATTTTGGTTTTAGTTCTTTTAACGAGATTGAGTCAAATGCACTGCAAACTTGTGGTATGGAGGAAAAGGGGCATTAG 816 0.4963 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTESEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLDKQAASHETSSSSPPPPPQSIPGNNHELKQTDGVQNAEDNSSLSPAENSSSGDESLLLDSICSDESLMNSLWLDDTPLMDALWDSEPKVQNNNNDMGLPSWEDNCAWFLDCQDFGVHDFGFSSFNEIESNALQTCGMEEKGH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1086 271 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa11g1086 271 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa11g1086 271 CDD SANT 16 61 IPR001005 -
Bisa11g1086 271 Gene3D - 12 67 - -
Bisa11g1086 271 MobiDBLite consensus disorder prediction 130 183 - -
Bisa11g1086 271 FunFam MYB transcription factor 11 67 - -
Bisa11g1086 271 PANTHER F14D16.11-RELATED 1 172 - -
Bisa11g1086 271 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa11g1086 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa11g1086 271 Gene3D - 70 142 - -
Bisa11g1086 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa11g1086 271 SMART sant 66 114 IPR001005 -
Bisa11g1086 271 SMART sant 13 63 IPR001005 -
Bisa11g1086 271 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa11g1086 271 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Bisa11g1086 271 MobiDBLite consensus disorder prediction 152 183 - -
Bisa11g1086 271 CDD SANT 71 112 IPR001005 -
Bisa11g1086 271 FunFam MYB transcription factor 70 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1086 Bisa-ChrBisa11 28443440 28444367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1086 1 250 MYB Transcription Factor Family AT4G22680 59.851 1.42e-101 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g1086 Myb_DNA-binding 2.8e-13 CL0123