Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1065 ATGGATGCAAGGGATGGAGTTAGTAGTGCGGTTACGGTGGTGGGATCAGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACTGAAAATCCACCGCCCACTGGCGGATCAACAACGCCGACACCTTCGCCGGCGCCGGCGACTGTTCCTGCTCCAGCGGCTCAAGGGAGTGTTCCTCCGCCGCAGCCGGCAGCGGTGGGAGCGGCGCCGCCTGGCATGACGATGCCGGTGAAGAAGAAGAGGGGTCGTCCAAGAAAGTATGGACCGGACGGGTCGGTGGCTGTGGCTCTGTCTCCCAAGCCGATATCTTCTTCGGCTCCACCCCATGTTATCGATTTCTCCGCAGATAAGCGCGGGAAAGTGCGTCCAGCTAGTTCGGTGAGCAAAGCCAAATTTGAGGTCGAGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACACCCCATATAATCACCGTTGATTCTGGGGAGGACGTTACTATGAAGATAATATCATTTTCCCAGCAAGGACCTCGAGCTATATGTATCCTTTCAGCAAATGGCATCATATCAAGTGTCACACTTCGTCAGCCTGATTCCTCTGGGGGCACACTGACATATGAGGGACGGTTTGAAATTCTGTCATTATCAGGGTCATTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCCGGTGGCATGAGCGTTTCTTTAGCAAGTCCAGATGGTCGTGTTGTAGGTGGTGGAGTGGCTGGTCTTTTGGTAGCTGCAAGTCCTGTGCAGGTAGTGGTAGGGAGTTTTCTGGCGGGAAACCAACATGAGCAAAAGCCGAAGAAGCAGAAACCCGAGGTGATAATGAGTGCCACACCAACTGCTGCTGTTCCCATGTCTAGTGTTGCTGATCCAGTGCCTCTTCTCACCTCTTCATCTTCCTTCCGTGGAGACAGTTGGTCTGCAATCCCAGCTGATACGAGGAATAACAATAAGCCAAACTGA 987 0.5289 MDARDGVSSAVTVVGSDAPSDYHVAPRTENPPPTGGSTTPTPSPAPATVPAPAAQGSVPPPQPAAVGAAPPGMTMPVKKKRGRPRKYGPDGSVAVALSPKPISSSAPPHVIDFSADKRGKVRPASSVSKAKFEVENLGEWVACSVGANFTPHIITVDSGEDVTMKIISFSQQGPRAICILSANGIISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKPEVIMSATPTAAVPMSSVADPVPLLTSSSSFRGDSWSAIPADTRNNNKPN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1065 328 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 298 IPR039605 GO:0003680
Bisa11g1065 328 CDD DUF296 150 241 IPR005175 -
Bisa11g1065 328 ProSiteProfiles PPC domain profile profile. 146 285 IPR005175 -
Bisa11g1065 328 MobiDBLite consensus disorder prediction 1 91 - -
Bisa11g1065 328 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 264 IPR005175 -
Bisa11g1065 328 MobiDBLite consensus disorder prediction 301 328 - -
Bisa11g1065 328 MobiDBLite consensus disorder prediction 33 67 - -
Bisa11g1065 328 FunFam AT-hook motif nuclear-localized protein 1-like 151 281 - -
Bisa11g1065 328 Gene3D - 151 282 - -
Bisa11g1065 328 SUPERFAMILY AF0104/ALDC/Ptd012-like 148 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1065 Bisa-ChrBisa11 28180576 28185013 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1065 6 325 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.798 4.20e-127 366