Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1061 ATGACAGGACACGGCCATTCTCTTCCTCCACCATTTCATCTACAGCACCAATTTCAGTCCCTCCATCAAAACACCGCCGAAGAGGAGCAAAGCGGCAGCACCAGTGGCCTCAAGCGAGAACGGGAAGAAACCACCGCCACCAACAACGTTAACGGCAGCGATCAAGGGAATAATAATATGAGTGAGATAGGGTCCGGAGAAGGCGGAGAAATGACGAGAAGACCCAGGGGCAGGCCCTCCGGCTCCAAGAACAAGCCCAAACCCCCCATCATCATCACCCGCGACAGCGCCAATGCCTTGCGCACCCACGTGATGGAGGTTGGAGACGGTTGCGACATCGTGGAAAGCGTGTCCGACTTCGCCAGGCGTCGCCAGCGTGGCGTCTGCATTATGAGCGGCACCGGCACCGTCACCAATGTCACTCTCCGGCAACCTGCTTCCTCTGGCGCCGTCCTCACTCTCCACGGCCGCTTCGAGATCTTGTCCCTCGCCGGCTCTTTCCTCCCCCCGCCGGCTCCACCGGCCGCCTCCGCGTTGACTATTTACTTGGCTGGCGGCCAGGGCCAGGTGGTCGGGGGGACGGTGGTCGGCACGCTCATGGCGGCGGGGTCGGTGGTGATCATGGCGGCGTCGTTTAGCAACGCGGCGTACGAGAGGCTGCCTTTGGAAGAGGAGGACCCTACTTCCATGGCGATGCAAGGAGGCGCGATTGGGTCGCCCGGGGGAGTTGGTCAGCAACAGCAGCAGCCGCATCAGGCGGCTCCGCTGATGGGGGATGCGACGGCGCCACTACTGCATGGGTTGCCTCCGAATCTTCTGAATTCTATACAGATGCCGACGGAGCCTTTCTGGGCCACTGCTCGTCCTCCCTATTGA 876 0.6142 MTGHGHSLPPPFHLQHQFQSLHQNTAEEEQSGSTSGLKREREETTATNNVNGSDQGNNNMSEIGSGEGGEMTRRPRGRPSGSKNKPKPPIIITRDSANALRTHVMEVGDGCDIVESVSDFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVLTLHGRFEILSLAGSFLPPPAPPAASALTIYLAGGQGQVVGGTVVGTLMAAGSVVIMAASFSNAAYERLPLEEEDPTSMAMQGGAIGSPGGVGQQQQQPHQAAPLMGDATAPLLHGLPPNLLNSIQMPTEPFWATARPPY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1061 291 CDD DUF296 101 168 IPR005175 -
Bisa11g1061 291 MobiDBLite consensus disorder prediction 232 253 - -
Bisa11g1061 291 MobiDBLite consensus disorder prediction 13 32 - -
Bisa11g1061 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 285 IPR014476 GO:0003680
Bisa11g1061 291 ProSiteProfiles PPC domain profile profile. 97 233 IPR005175 -
Bisa11g1061 291 MobiDBLite consensus disorder prediction 1 91 - -
Bisa11g1061 291 FunFam AT-hook motif nuclear-localized protein 100 227 - -
Bisa11g1061 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 227 - -
Bisa11g1061 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Bisa11g1061 291 PIRSF ESCAROLA 12 291 IPR014476 GO:0003680
Bisa11g1061 291 MobiDBLite consensus disorder prediction 46 65 - -
Bisa11g1061 291 Gene3D - 100 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1061 Bisa-ChrBisa11 28066028 28066903 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1061 7 291 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 53.474 5.63e-82 248