Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1058 ATGAGCGATGATGATCAAATGGAGGGTGGGATGAGAAGGGGAAAAGCACTGAAGTGGCAGAATTGGAGTGTTGAGGCAGCGAGTGGCTTCGAAAATCTGGGGGTGCCACCTCCCTATCTCATTTCAATTAAAAGAAAAAAGATGGGTTCGCAACAGAACGATGGCACGAGCTACCAGCCCTCGGAGCCGAAGCCATGCGCCAACAACTGTGGCTTCTTTGGGACCGCTGGCACCATGAACCTCTGCTCTAAGTGTTACAGAGACTTCCAAATCAAGGAAGAGCAGGCCGCTTCCGCCAAGGCTGCCATGGAGAAATCCCTCAGTCACAGACCCCTCCCCTCCTCTAAGACGCTGAAATCTACCCCTTCAGCGGAATTCCTTTTCGGATCTTCCTTGTCTTCCTCGTCTTCTTCGGAATCGTTGCCCTCATCGTCGGCGATTTCCGGTGGCGACCAAGGGCAGCCCAAGGCGCCGAATCGGTGTTGGAGTTGTAAGAAGAAGGTGGGATTGACCGGATTCAATTGCAAGTGTGGGAGTACTTTCTGCGGGACCCATCGTTATCCGGAGAAGCACGACTGCACATATGATTTCAAGGGTGCTGGCCGTGATGCGATTGCCAAGGATAATCCTGTGGTAAAAGCCTCCAAACTGGAGAGGTTTTAG 663 0.5249 MSDDDQMEGGMRRGKALKWQNWSVEAASGFENLGVPPPYLISIKRKKMGSQQNDGTSYQPSEPKPCANNCGFFGTAGTMNLCSKCYRDFQIKEEQAASAKAAMEKSLSHRPLPSSKTLKSTPSAEFLFGSSLSSSSSSESLPSSSAISGGDQGQPKAPNRCWSCKKKVGLTGFNCKCGSTFCGTHRYPEKHDCTYDFKGAGRDAIAKDNPVVKASKLERF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1058 220 Gene3D - 48 112 - -
Bisa11g1058 220 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 66 109 - -
Bisa11g1058 220 PANTHER AN1-TYPE ZINC FINGER PROTEIN 63 219 - -
Bisa11g1058 220 Pfam A20-like zinc finger 65 87 IPR002653 GO:0003677|GO:0008270
Bisa11g1058 220 Gene3D - 131 216 IPR035896 -
Bisa11g1058 220 MobiDBLite consensus disorder prediction 133 152 - -
Bisa11g1058 220 SMART AN1_Zf_4 161 198 IPR000058 GO:0008270
Bisa11g1058 220 ProSiteProfiles Zinc finger AN1-type profile. 155 201 IPR000058 GO:0008270
Bisa11g1058 220 SUPERFAMILY AN1-like Zinc finger 152 215 IPR035896 -
Bisa11g1058 220 Pfam AN1-like Zinc finger 161 197 IPR000058 GO:0008270
Bisa11g1058 220 ProSiteProfiles Zinc finger A20-type profile. 60 94 IPR002653 GO:0003677|GO:0008270
Bisa11g1058 220 MobiDBLite consensus disorder prediction 133 158 - -
Bisa11g1058 220 SMART A20_3 63 87 IPR002653 GO:0003677|GO:0008270
Bisa11g1058 220 FunFam Zinc finger AN1-type containing 6 134 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1058 Bisa-ChrBisa11 28032767 28034298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1058 60 220 C2H2 Transcription Factor Family AT3G52800 40.854 5.20e-40 133