Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1023 ATGACGTCGTCTCAGGAGCACGAGATGGATCAAGATGACGATGGAGGAACGTCCGACCTCAGCACCAGCGCCGGCGACCCTGCCCCCGTCACCACCGACAAAAACAATGGACCCTCGAAGCGGACCGATACGACGCCGTTCCAGGTCTTGCCGTTGAAAGAGGAGCCCGTAGATTCGGATCCCCCGTCAGACTCCGACCATAACACGCAGCCACCTTCGCCTGCGCCGATTGGGGTTGTTCCTGTGGCGATGCAGATGCAGATGCAAATGCCCCTGTCCATGCCGGTCACTACGGCCAGACGTTCCTCCACCAAGGACCGTCACACGAAGGTCGAAGGCCGCGGACGCAGGATCCGAATACCCGCGACTTGCGCGGCTCGGATCTTTCAGCTGACCCGGGAATTAGGCCACAAGTCCGACGGCGAAACCGTCCGGTGGCTGCTCGAACATGCCGAGCAAGCCATCATCGAGGCCACCGGCACCGGCACCGTTCCGGCTATCGCTGTCTCCGTCGGGGGGACTCTGAAGATTCCCACAACGTCCGGCACTAACAGCAATCCGGATTCCGAACTCAGGAAGAAGCGGAAACGGCCGTCGAACAGCGAGTTTGTGGACGTGAGTGAAGCCGTTTCACAATCTTCCGGTCTGGCCCCGGTTCAATCGGGGGTACCGCAGGGTCTTGTGCCTGTTTGGGCTGTGGGCAACACTAATATGATGATCCCGGCAAACGCCTTTTGGATGATCCCGCCAGCGACGACGACCTCCGTGGCCGGAGTTACAGGGTCGTCAAACCAGCAACCTCAGATATGGGCTCTGTCTCCGACGGTGACCCCCGTGTTCAACATGTCAGCGAGACCTGTATCGTCTTTGTTGGGGGCAACGAATACGTCGAGCGGAGTAGAAGTTTCACCGGCGGGATGCAACAGCTCGTCAAACTCGGCAGCGGTGAGTACGAGCACGGTAGGGCCGAAGGTGGCGAAGAAGTCGACGATGGCGCCGAGTGTTAGTTGTAGCGGAGCGACAGGTAGCAGTAGTAGTGGAAGCGGTATCGGTAGCAAGGCGCAGATGTTGAGGGACTTTTCATTGGAGATTTACGATAAGCAAGAGTTGCAGTTGATGGGGCGGTCTGGGAATAAACAAGCGTAA 1146 0.5864 MTSSQEHEMDQDDDGGTSDLSTSAGDPAPVTTDKNNGPSKRTDTTPFQVLPLKEEPVDSDPPSDSDHNTQPPSPAPIGVVPVAMQMQMQMPLSMPVTTARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSGTNSNPDSELRKKRKRPSNSEFVDVSEAVSQSSGLAPVQSGVPQGLVPVWAVGNTNMMIPANAFWMIPPATTTSVAGVTGSSNQQPQIWALSPTVTPVFNMSARPVSSLLGATNTSSGVEVSPAGCNSSSNSAAVSTSTVGPKVAKKSTMAPSVSCSGATGSSSSGSGIGSKAQMLRDFSLEIYDKQELQLMGRSGNKQA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1023 381 MobiDBLite consensus disorder prediction 188 202 - -
Bisa11g1023 381 ProSiteProfiles TCP domain profile. 104 158 IPR017887 -
Bisa11g1023 381 MobiDBLite consensus disorder prediction 93 113 - -
Bisa11g1023 381 Pfam TCP family transcription factor 103 180 IPR017887 -
Bisa11g1023 381 MobiDBLite consensus disorder prediction 16 46 - -
Bisa11g1023 381 MobiDBLite consensus disorder prediction 300 352 - -
Bisa11g1023 381 MobiDBLite consensus disorder prediction 175 205 - -
Bisa11g1023 381 MobiDBLite consensus disorder prediction 1 78 - -
Bisa11g1023 381 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 352 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1023 Bisa-ChrBisa11 27189027 27190172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1023 100 378 TCP Transcription Factor Family AT2G45680 49.835 6.57e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa11g1023 TCP 4.9e-28 No_clan