Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1014 ATGATACTGGCGTCGGCGCGCCCGAAGAAGAGGGCCGGGCGGAGGGTGTTTAAGGAGACGAGGCATCCTGTTTACCGGGGAGTGCGGCGGAGGAACAACGACAAGTGGGTGTGCGAGGTTCGCGTGCCCAATGATAACAAGTCGAGGATTTGGCTGGGAACGTATTCCACGCCTGAGAAGGCAGCCAGGGCTCACGATGTTGCGGCGCTGGCACTTCGGGGAAGGTCGGCTTGCCTCAATTTCGCCGAATCGGCGTGGCGGCTCCCGGTGCCGGCATCCACCGATCCGGAGGAGATCAGGAGGGTGGCAGCCCAGGCGGCGGAGTCTTTCGAGGATGAATTCGGGGCTGGGACTTCAGTTCCGGCGGTTTGTTCTTCGGAGAATGATGATCAGGTGCTGATGAGCATGGTGGATGAGCCGTTGAGATCGCCACCTCATCATCTCGTGACACTTGGCTGGGACTCCAATCCTGAAGTGGAGTTCGATTCTGAGGTGTCACTTTGGAGCTTTACAGCTTGA 519 0.5915 MILASARPKKRAGRRVFKETRHPVYRGVRRRNNDKWVCEVRVPNDNKSRIWLGTYSTPEKAARAHDVAALALRGRSACLNFAESAWRLPVPASTDPEEIRRVAAQAAESFEDEFGAGTSVPAVCSSENDDQVLMSMVDEPLRSPPHHLVTLGWDSNPEVEFDSEVSLWSFTA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1014 172 ProSiteProfiles AP2/ERF domain profile. 24 82 IPR001471 GO:0003700|GO:0006355
Bisa11g1014 172 FunFam Ethylene-responsive transcription factor 2 23 83 - -
Bisa11g1014 172 SMART rav1_2 24 88 IPR001471 GO:0003700|GO:0006355
Bisa11g1014 172 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 169 IPR045277 GO:0003700
Bisa11g1014 172 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Bisa11g1014 172 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Bisa11g1014 172 SUPERFAMILY DNA-binding domain 24 83 IPR016177 GO:0003677
Bisa11g1014 172 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Bisa11g1014 172 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Bisa11g1014 172 CDD AP2 25 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1014 Bisa-ChrBisa11 27000304 27000822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1014 1 170 AP2-EREBP Transcription Factor Family AT1G63030 56.906 3.55e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g1014 AP2 3.7e-14 CL0081