Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1013 ATGGCTTCAACTCCAACGTCTTCTCCCAGGAGCAAGAAGCATCCTCTGTACCATGGCATCCGGTGCCGGAGTGGGAAGTGGGTGTCGGAGATCCGGGAGCCACGCAAGAGTTCGCGCATATGGCTGGGGACGTTCCCCACTGCGGAGATGGCCGCCGCCGCCTATGATGTGGCGGCGCTGGCCCTCAAAGGCGGCGACGCAGTCCTCAACTTCCCCGACTGGGCCGGCAGCTACCCGGTGCCGGCGTCTTCCTCTGCCGCCGACATTCGCAGTGCCGCCACCGCCGCAGCCTCGCTCATGATGTCTCACACTCAGACACAAACTCATGACCACGATGCATCAGCGTCATCGGTTGGTGATGTGGCAGGTAACAGTAACGACAACAATGTGGGGGGGTCGGAATTAACAGAGTTTGTGGACGAGGAAGCCATTTTCGACATGCCCAGTTTGCTGGTGGACATGGCTGAGGGAATGCTGCTTTCACCTCCCAGAATCTCCCCTCCTCCCTCTGATAACTCTCCTGATGATAAACTATGGAACTATTTTTGA 549 0.5811 MASTPTSSPRSKKHPLYHGIRCRSGKWVSEIREPRKSSRIWLGTFPTAEMAAAAYDVAALALKGGDAVLNFPDWAGSYPVPASSSAADIRSAATAAASLMMSHTQTQTHDHDASASSVGDVAGNSNDNNVGGSELTEFVDEEAIFDMPSLLVDMAEGMLLSPPRISPPPSDNSPDDKLWNYF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1013 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 156 - -
Bisa11g1013 182 ProSiteProfiles AP2/ERF domain profile. 16 72 IPR001471 GO:0003700|GO:0006355
Bisa11g1013 182 FunFam Ethylene-responsive transcription factor 2 15 73 - -
Bisa11g1013 182 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Bisa11g1013 182 Gene3D AP2/ERF domain 16 73 IPR036955 GO:0003700|GO:0006355
Bisa11g1013 182 MobiDBLite consensus disorder prediction 161 182 - -
Bisa11g1013 182 Pfam AP2 domain 17 64 IPR001471 GO:0003700|GO:0006355
Bisa11g1013 182 SUPERFAMILY DNA-binding domain 16 73 IPR016177 GO:0003677
Bisa11g1013 182 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1013 Bisa-ChrBisa11 26988672 26989220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1013 6 181 AP2-EREBP Transcription Factor Family AT5G52020 51.613 6.99e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g1013 AP2 4e-10 CL0081