Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0997 ATGGCACCATTGCCTGTGGAGCAGACTGGTGAATCAGCACTAACTGACTCTCAGAGATCTATTCCGACGCCGTTTCTAACGAAAACCTACCAACTCGTGGATGATCCCTCTGTGGATGACCTAATTTCCTGGAACGAAGACGGAACGAGTTTCATAGTTTGGCGAGCTGCTGAATTCGCTCGAGATTTGCTTCCCAAGTATTTCAAACACAACAACTTCTCCAGTTTCGTCCGTCAGCTCAATACCTATGGATTTCGGAAGGTTGTCCCGGACCGTTGGGAATTCGCTAATGACTGTTTCCGGCGGGGCGAGAGGAGCCTGCTTCGAGACATACAACGGCGGAAGATATCACCGTCTACGGCTGCCGCAGCTCCAGCCAATACTGTGACGGTGGCGGTGCCTGCTGTGCCTACCGTCGCCAAAGCAGTATCCCCGACCAACTCTGGTGAGGAACAGGTAATCTCTTCAAACTCATCTCCAATTGCTGCACAGCGAACCACCAGTTGCACCACTGGGCCCGAACTCACAGAAGAGAATGAAAAACTTAGGAAAGAGAACACGGAATTGAATAACGAATTGAGTCAATTGAAGGGTTTGTGTAATAATATACTAACATTGATGACGAATTATGCTTCAAGCCAATTAGAGTCTACTAGTGTTCCTGAAGGAAAACCGTTGGAGCTTTTACCTGCGATGCAAGCTTCGGCTGAGGAGGCCGTCGTGGGAGTCGGCACGAATGCTTCCTGTGAGACGATAGCAGCAGAAGCGGAGGTACCCAAGCTGTTTGGGGTTTCTATTGGAACTAAACGACGTCGGAGTTCAGAGGGAGAGGAAGCAGAGAAAGAAGAACAAAATCAAACACAGTCCTCTCAGGAACCCGATGGTGGCTCCGATGTGAAGACAGAGCCACCAGATGGAAGCAACTCCGATGACCCGGAGACACCCTGGTTGGAGCTTGGCAAATAA 966 0.5 MAPLPVEQTGESALTDSQRSIPTPFLTKTYQLVDDPSVDDLISWNEDGTSFIVWRAAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGERSLLRDIQRRKISPSTAAAAPANTVTVAVPAVPTVAKAVSPTNSGEEQVISSNSSPIAAQRTTSCTTGPELTEENEKLRKENTELNNELSQLKGLCNNILTLMTNYASSQLESTSVPEGKPLELLPAMQASAEEAVVGVGTNASCETIAAEAEVPKLFGVSIGTKRRRSSEGEEAEKEEQNQTQSSQEPDGGSDVKTEPPDGSNSDDPETPWLELGK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0997 321 MobiDBLite consensus disorder prediction 144 179 - -
Bisa11g0997 321 FunFam Heat stress transcription factor B-4 17 115 - -
Bisa11g0997 321 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Bisa11g0997 321 MobiDBLite consensus disorder prediction 270 287 - -
Bisa11g0997 321 Gene3D - 17 115 IPR036388 -
Bisa11g0997 321 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0997 321 MobiDBLite consensus disorder prediction 144 175 - -
Bisa11g0997 321 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0997 321 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0997 321 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0997 321 MobiDBLite consensus disorder prediction 260 321 - -
Bisa11g0997 321 Coils Coil 172 199 - -
Bisa11g0997 321 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa11g0997 321 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 290 IPR027725 -
Bisa11g0997 321 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0997 Bisa-ChrBisa11 26687974 26689051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0997 16 321 HSF AT4G11660 59.756 1.04e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa11g0997 HSF_DNA-bind 1.8e-32 CL0123