Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0987 ATGTACTCGTCAATCGTTTTTGAACGCCCTAAGGCGTTATCGAAGCTTCTCTGCAACTTCATCTTGGCCCGAAACATGGGCGGAGGTCCTCGCACTTTCCCCGGCGGAGTCAACAAGTGGAAATGGAAGCGCATGCATGAGAAGCGAGCCAGAGATAAGGAGAAAAGGCTTCTCGAACAAGAAAAGCAGCTCTACCAAGCTCGCATTCGCTCCCATATCCGAGCCAAACTTGCGGGAAAACCTGACAGTTCTTCCGCCACTCACAGTCCTATGGGCCCTGAGGACCACATTAAGGCCTTAGCCAATCGTTTTATGAAGGAAGGGGCTGAAGATCTCTGGAACAGAAGTGACGGTCCCTTAAAGTCTCCGCCTCCTCGTCTCAAAGAATTTCCAGGATCGACCAGACGGCCAGGATCAATTGGATCGCAAATTGATATGAGGAAACTGATATCGGACGGTCGCCAGAACGACAATTTGATGAATACGAGTAGTAATTATACTCAGACTAGGGATTACTCAACGCAAAGTCGAAGGAGGTTTCAGAGGAATGAGAGCTCTTCGGACGAGGAGGATTCCAGTTCTGGTTTGGAGGGAAATCCTGCAAGGCTCATCACTAGAAATTCAGTAAGTACTCAGAAAAATGTGATTAAGGCAAACGTGGGTACTATAAACAATAAGAAAAATATGCCGAAAAGGCAGCGAAAGTTTTGGAGAGATGATAGTTCTTCCAGCGAGAGTGAATCCGACTTGGATTCAGAGGGTTTAAGAATTGGCGGAGATTTAAATAAGATAGGTAGTAGTGCTTCTCTTGGGAAGTATGACATAAAGACGAAAAGAAGGTTGCTGCCGAAGCCATATGATGAGGAGAGTGATCTTTCGGAACAGGTTGAATTGATCAGGTATGAACTAAATAAGAGGAAGATGACAGAGAATAAGCAGCAGAAAGTTGAGGAAGAAACGCTACTTAGTCAGAAAAGATTTGATGAGTGTGGTATATCACCATTGACAATCAAGGCACTCTCTTCGGCTGGTTATATTCACATGACTCGTGTTCAAGAGGCTAGCCTTTCTGTTTGCCTCGAGGGCAAGGATGCTTTGGTCAAAGCTAAAACTGGTACTGGGAAAAGTGCTGCATTTTTGCTTCCTGCTATTGAAACAGTTCTTAAAGCAATGAGTAAAAATTCCCCTCAACGTGTGCCAGTGCCTCCGATATTTGTTCTTATTCTCTGCCCAACCAGAGAACTTGCTAGTCAAATTGCTGCTGAATTAAAAGCTCTACTGAAGTACCATGAGGGAATTGGGGTGCAAACTCTGGTAGGAGGCATTCGATTTAAAGATGACCAGAAACGTCTTGAATCAGATCCATCCCAGATAATTGTTGCTACTCCAGGTAGGTTGCTGGATCATATTGAGTATAAGTCTGGAATATCCCTGCGGTTGATGGGTTTGCAGATGCTTGTTCTTGATGAAGCTGATCATTTATTGGACCTGGGATTTCGAAAGAGTGTGGAAAAGCTTGTTGATTGTTTGCCCCGTCAGAGGCAATCCTTGCTATTTTCTGCAACCATTCCAAAGGAGGTCCGTCGAATCTCTCAGCTTGTTCTGAAAAGGGAACATGCATATATTGATACAGTGGGGATAAGTTGTGTGGAAACTCCTGTTAAGTTAAAGCAATCTTATATTATTGCTCCCCATGAATCACATTTTCAAATATTGCACCATATTTTGAAGGAGCATATATTGCAAGCACCTGATTATAAGGTTATTGTTTTCTGTATGACTGGGATGGTGACTTCACTCTTACATCAACTTCTTCGAGAAATGAAAATGAATGTTAGGGAGATACATTCTCGAAAACCCCAACTTTATCGAGCTCGCATATCAGATGAGTTCAGGGAATCAAAAAAACTGATTCTTGTCTCATCTGATGTTTCATCCCGTGGAATGAATTATCCTGATGTTACCTTAGTCATTCAGGTGGGTATTCCTTCTGATCGAGAACAGTATATACATCGTGTTGGAAGAACAGGACGAGAAGGCAAAGAAGGGGAAAGCATATTGTTGATTGCTCCATGGGAAGAGTACTTTTTAGATGAGATCAAGGATCTCTCTCTCAAGAGATTCCCTTTACCTGATATAGATCCCGAGACAAAGCTTAAGATAGAAAATTCAATGGCTAAGATTGACAACGACGTGAAAGAATCAGCATATCATGCTTGGCTTGGTTATTATAATTCGATCAGGGAAATTGGGAGAGATAAGACTACTCTAGCTGAGCTGGCGAGCCAATTTTCTGCCACAATTGGTTTGCCGATGCCTCCTGCTCTGTTTAGAAAGACTGCACTAAAAATGGGATTGAAAGATATTCCCGGCATCAGAATTCGTAGATAG 2391 0.4295 MYSSIVFERPKALSKLLCNFILARNMGGGPRTFPGGVNKWKWKRMHEKRARDKEKRLLEQEKQLYQARIRSHIRAKLAGKPDSSSATHSPMGPEDHIKALANRFMKEGAEDLWNRSDGPLKSPPPRLKEFPGSTRRPGSIGSQIDMRKLISDGRQNDNLMNTSSNYTQTRDYSTQSRRRFQRNESSSDEEDSSSGLEGNPARLITRNSVSTQKNVIKANVGTINNKKNMPKRQRKFWRDDSSSSESESDLDSEGLRIGGDLNKIGSSASLGKYDIKTKRRLLPKPYDEESDLSEQVELIRYELNKRKMTENKQQKVEEETLLSQKRFDECGISPLTIKALSSAGYIHMTRVQEASLSVCLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMSKNSPQRVPVPPIFVLILCPTRELASQIAAELKALLKYHEGIGVQTLVGGIRFKDDQKRLESDPSQIIVATPGRLLDHIEYKSGISLRLMGLQMLVLDEADHLLDLGFRKSVEKLVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGISCVETPVKLKQSYIIAPHESHFQILHHILKEHILQAPDYKVIVFCMTGMVTSLLHQLLREMKMNVREIHSRKPQLYRARISDEFRESKKLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRVGRTGREGKEGESILLIAPWEEYFLDEIKDLSLKRFPLPDIDPETKLKIENSMAKIDNDVKESAYHAWLGYYNSIREIGRDKTTLAELASQFSATIGLPMPPALFRKTALKMGLKDIPGIRIRR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0987 796 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 575 725 IPR001650 -
Bisa11g0987 796 MobiDBLite consensus disorder prediction 233 256 - -
Bisa11g0987 796 Coils Coil 298 318 - -
Bisa11g0987 796 MobiDBLite consensus disorder prediction 192 227 - -
Bisa11g0987 796 Gene3D - 302 543 IPR027417 -
Bisa11g0987 796 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 325 353 IPR014014 GO:0003724
Bisa11g0987 796 Gene3D - 551 771 IPR027417 -
Bisa11g0987 796 SMART ultradead3 344 559 IPR014001 -
Bisa11g0987 796 MobiDBLite consensus disorder prediction 113 257 - -
Bisa11g0987 796 CDD SF2_C_DEAD 556 689 - -
Bisa11g0987 796 MobiDBLite consensus disorder prediction 154 174 - -
Bisa11g0987 796 Pfam DEAD/DEAH box helicase 349 529 IPR011545 GO:0003676|GO:0005524
Bisa11g0987 796 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 356 541 IPR014001 -
Bisa11g0987 796 Coils Coil 43 63 - -
Bisa11g0987 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 697 IPR027417 -
Bisa11g0987 796 MobiDBLite consensus disorder prediction 175 189 - -
Bisa11g0987 796 PANTHER RNA HELICASE 288 725 - -
Bisa11g0987 796 Pfam Helicase conserved C-terminal domain 574 679 IPR001650 -
Bisa11g0987 796 SMART helicmild6 599 680 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0987 Bisa-ChrBisa11 26603523 26608292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0987 327 705 Eukaryotic Initiation Factors Gene Family AT3G19760 27.960 4.57e-43 159