Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0985 ATGGCGTTCAGTGGAACTGTCCAAAAATGCAAGGCTTGCGATAAAACTGTTCACTTCATTGACACTTTGTCCGCCGACGGTGTCTTTTATCACAAGACTTGCTTCAAATGCAGTCACTGCAATGGCCTTCTTGTGATAAGCAACTACTCCTCCATGGATGGTGTCCTGTACTGCAAGACCCACTTTGAGCAGCTTTACAAGGAGGCTGGCATCCTTACCAAGAAATTTCAGTCATGTAAGTTTATATTTTGA 252 0.4365 MAFSGTVQKCKACDKTVHFIDTLSADGVFYHKTCFKCSHCNGLLVISNYSSMDGVLYCKTHFEQLYKEAGILTKKFQSCKFIF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0985 83 Pfam LIM domain 10 64 IPR001781 -
Bisa11g0985 83 SMART lim_4 9 61 IPR001781 -
Bisa11g0985 83 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Bisa11g0985 83 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Bisa11g0985 83 Gene3D Cysteine Rich Protein 2 70 - -
Bisa11g0985 83 PANTHER OS06G0237300 PROTEIN 6 76 - -
Bisa11g0985 83 FunFam LIM domain and actin-binding 1 4 74 - -
Bisa11g0985 83 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Bisa11g0985 83 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0985 Bisa-ChrBisa11 26580809 26581368 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa11g0985 LIM 5.7e-11 CL0167