Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0983 ATGGGTTGGCGCCCAGGCGGCAGGAATGGTCAAAGTGCAAAGTGGGAGTGCCGAGATCGTGAAATCCAGGATAAAGGAGACGATGCTGGAGGAGATGACACAGAAGGAGACGACACCAGAGGAGAGCACGTCGGAGGAGACGACGCCGGAGATTATAAGTTGAAGGCAGTGAAAGGAGAAAGAGAAGGGAAAATGAGAGTGGCAGGAGCATATTCGGGAGTGTTGCCTGCAGGGTCTCACTCTCTGCCGTTGGCAAGGATCAAGAAGATAATGAAGAGCTCCGGTGACGACGTCAAAATGATATCAGGAGACGCTCCCATTGTGTTTGCTAAAGCTTGTGAACTCTTCATTCAGGAACTAACCTTAAGGTCCTGGACTCTTGCGGCTCAACCCAAACGTAGAACCCTCCACAAACATGACGTCGCTTCCGCCGTCATAGCCACTGATCTCTTTGATTTCTTGATCCACTTGGTCTGCGATTCTGCCACTGCATCCTCTCACATAGAAACGCCGTGA 516 0.5116 MGWRPGGRNGQSAKWECRDREIQDKGDDAGGDDTEGDDTRGEHVGGDDAGDYKLKAVKGEREGKMRVAGAYSGVLPAGSHSLPLARIKKIMKSSGDDVKMISGDAPIVFAKACELFIQELTLRSWTLAAQPKRRTLHKHDVASAVIATDLFDFLIHLVCDSATASSHIETP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0983 171 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 158 - -
Bisa11g0983 171 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 81 145 IPR003958 -
Bisa11g0983 171 SUPERFAMILY Histone-fold 76 154 IPR009072 GO:0046982
Bisa11g0983 171 MobiDBLite consensus disorder prediction 13 29 - -
Bisa11g0983 171 MobiDBLite consensus disorder prediction 1 50 - -
Bisa11g0983 171 FunFam Nuclear transcription factor Y subunit C 62 160 - -
Bisa11g0983 171 MobiDBLite consensus disorder prediction 36 50 - -
Bisa11g0983 171 Gene3D Histone, subunit A 65 159 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0983 Bisa-ChrBisa11 26548697 26554813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0983 79 158 CCAAT-HAP5 Transcription Factor Family AT1G54830 65.000 1.28e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa11g0983 CBFD_NFYB_HMF 4.8e-18 CL0012