Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0977 ATGGCGTCTAAGTTCTTGGCGTTAACCTGCATCCGTAGTGCAGGATGGGGTCAGTTATCGCCACGCCCTCACTATCCGTCGATGCCGAGGTACCCGAAGGGCGTGGCGGCGGAAGGGAGCAGCTTCGAGGGATCAGAGGTGAAGGCTCTTTTCTCCGTCATCGGAATGACTTGCTCTGCCTGCGCCGGCTCCGTCGAGAAGGCGATCAAGCGCTTACCTGGAATTCGTGAGGCCCTCGTCGATGTTCTGAATAATCGAGCTTTGGTCGACTTCTACCCTTCATACGTTAACGAGGAAACTATCCGCGAGGCCATTGAAGATGCTGGGTTCGAAGCTACATTGCTCAAAGATGAGATGAATGAAAGATCCGTTCAAGTATGCCGCATAACCATAGCTGGAATGACTTGCACTTCTTGCTCCTCAACTGTTGAATCAGCTCTGCAAGCAATTCCAGGTGTGCTGAAAGCTCAAGTGGCTTTGGCAACTGAAGAAGCAGAAGTACACTACAACCCAAGCATTCTTAGCTGCAATCAGATTCTGGATGCCATAAAAGACACTGGATTTGAAGCCACACTTATCAGTTCAGGTGAAGACCTGAGCAAGGTAGACCTCCAAGTTGAGGGTGTACGATCGGATCATTCAATGAGAATCATTGAAAATTCTCTTCAAGCTCTCCCAGGGGTTCAAAGTATAGAACTATCTCCCGAGGTCAATAAGATATCACTTTCTTTTAAACCAGACACAACAGGTCCCAGGAATTTCATCAACGTGATTGCGGGAACTGGATCCGGGCGTTTCAAGGCCAAAATATTTCCTCAAGAAGGGGGACGAAGAGATACTCATAGACGGGAGGAAATCAAACAATATTATAGATCTTTCCTATGGAGTTTGGTTTTTACTGTTCCAGTCTTCCTATTGTCTATGGTGCTTATGTATATCCCGGGAATTAAGCATGGATTAGAAACCAAAGTTGTCAATATGCTTAATGTGGGGCAGCTTTTAAGATGGGTTCTTTCCACACCAGTGCAATTCATTATTGGCCAGCGATTCTACTCTGGTTCTTACAAAGCATTACGCCGTGGCTCTGCTAACATGGATGTTTTGATTGCCTTGGGAACAAATGCAGCATACTTCTATTCAGTATACTCTGTCCTGAGAGCTGCTACCTCTCCACATTTTGAGGGTACAGATTTCTTTGAGACTAGCGCTATGCTTATCTCATTTATTTTGCTCGGAAAGTATCTCGAAGTTTTTGCCAAGGGGAAGACATCCAATGCAATTGCCAAGCTCATGAACTTGACCCCGGATACAGCGACGTTGTTAACCTTGGACGATGAAGGAAACGCTATTAATGAAGAAGAAATAGACAGCCGATTGATTCAAAAGAATGATATGATTAAAATTATTCCCGGCGCAAAAGTAGCTTCAGATGGATCTGTTATCTGGGGCCAGAGCCACGTCAATGAGAGCATGATAACAGGAGAAGCACGTCCTGTGGCAAAGAGGAAGGGCGACACCGTTATTGGAGGAACTGTCAATGAGAACGGGGTGTTGCATGTCAGGGCAACAAGAGTTGGATCAGAGAGTGCTCTCTCACAGATTGTTCGACTTGTTGAGTCAGCACAGTTGGCCAAAGCTCCCGTGCAGAAGTTTGCTGACCGCATTTCAAAATACTTTGTGCCTCTGGTCATCTTGATCTCATTTACAACTTTTCTTGCCTGGTTTTTAGCTGGAAGGTTTTATGCTTACCCAAAGTCTTGGATACCATCTTCCATGGACAGTTTTGAGCTTGCTTTGCAGTTTGGCATCTCTGTGATGGTTATAGCTTGCCCTTGTGCTTTAGGTCTAGCCACGCCAACTGCTGTTATGGTTGGCACTGGAGTTGGTGCATCTCAAGGTGTACTGATCAAAGGAGGCCAAGCATTAGAAAGTGCACATAAGGTGAGCTGCATAGTCTTTGACAAGACTGGTACTCTCACCAATGGGAAGCCTGTGGTTGTAAACACTAAACTATTGACAAATATGGTACTCCAAGAATTCTATGAACTTATAGCCGCAGCTGAGGTGAATAGTGAGCATCCACTGGCCAAGGCCATTGTTGAATATGCCAAAAAATTTAAAGATGAAGAGAGCCCTGCCTGGCCCGAAGCACGAGATTTTGTCTCTATTACAGGGCACGGAGTGAAGGCCACTGTTCGGAACAAGGAAATACTTGTTGGGAACAAGAGCTTGCTGTCTGACCACAATATTGTAGTTACCGCAGATGCTGAAGATATATTGGCGGAAACTGAGGGAATGGCTCAAACTGGAATTTTAGTGTCCATTAATGGGCGAGTGGCTGGGGTTATAGCAATATCTGATCCGCTGAAAACGGGTGCTCAAGAAGTCATTTCAATCCTCAAGTCCATGAACATTAGAAGCATCATGGTGACTGGTGACAACTGGGGAACCGCTAATTCCATCGCAAGGGAAGTTGGCATTGAAGATGTTATTGCTGAGAGTAAACCGGATCAGAAAGCAGAGAAAGTGAAGGAGTTGCAGGCTTCTGGCTACACAGTGGCAATGGTTGGAGATGGCATAAATGATTCACCAGCACTTGTAGCAGCAGATGTGGGAATGGCAATTGGTGCTGGCACAGACATCGCCATTGAGGCTGCAGATATTGTTCTGATGAAGAGCAACTTGGAGGATGTTATAACTGCCATTGACCTTTCCAGAAAAACATTTTCTCGTATCCGCCTCAATTACATTTGGGCTTTGGGTTATAATCTGCTCGGCATTCCAATCGCCGCCGGTGCTCTGTTCCCTTCCACAGGATTCCGATTGCCACCGTGGATTGCCGGGGCTGCCATGGCGGCATCTTCTGTGAGCGTTGTTTGTTGCTCCCTGTTGTTGAAATATTACAGGAGACCCAAGAAACTGGACAAGCTTGAGATACGGGGCATCAGCATCGATGTGAAGATTGAGGATATACCCATGATGTTCATACAATCCAGAGGCAAAGACATTTATGGAATCCAAAATCTTGCCCAAAAGCACGACTATACGCAGAGCCACGACGCCACAAAATTGGATTCATCGCTGTGTTTCCTTCTCAATGCTCTGCGAGTCGCATCTTGTTTGGCAGAAACACAACAGCACCGACACTTTCTGCGTCACTCGTCAAAGCACTTCTTATCCATTTCCAAAGCTCACTTCCGTCATTCTCAGGTTTCGTCGTCTAGTATTCCAGTTATAGTGAGGTTTTCGAGGCCCTTGTCACTCATTGTGAGATCAGATCATTCAATGGCTACCTCTTCAAAGAATGGATCAATATACGATTTCACTGTTAAAGATGCCAAGGGAAATGATGTCAATCTCGGCGATTACAAAGGAAAGGTCCTTCTCATTGTCAACGTTGCCTCACAATGTGGCTTGTCTAATTCAAACTACACAGAGCTGAATCAGTTGTATGAGAAGTACAAAGATAAAGGTCTGGAAATTCTGGCATTCCCATGCAATCAATTTGGGTCACAGGAGCCTGGAAGTAATGAACAGATATTAGAGGTCACTTGTACTCGCTTTAGGGCCGAGTTTCCCATTTTCGAGAAGGTAAATGTGAAAGGGGACAATGCTGCTCCATTATACAAGTTCCTAAAATCAAGCAAAGGCGGAATTTTTGGGAGTGGTATCAAATGGAATTTCTCCAAATTCCTTGTAGATAAAGAAGGGAATGTGATTGATCGTTACGCACCCACAACTTCTCCTCTTAGCATTGAGAAGGACATAAGGAAACTGTTGGGTGCATGA 3789 0.4539 MASKFLALTCIRSAGWGQLSPRPHYPSMPRYPKGVAAEGSSFEGSEVKALFSVIGMTCSACAGSVEKAIKRLPGIREALVDVLNNRALVDFYPSYVNEETIREAIEDAGFEATLLKDEMNERSVQVCRITIAGMTCTSCSSTVESALQAIPGVLKAQVALATEEAEVHYNPSILSCNQILDAIKDTGFEATLISSGEDLSKVDLQVEGVRSDHSMRIIENSLQALPGVQSIELSPEVNKISLSFKPDTTGPRNFINVIAGTGSGRFKAKIFPQEGGRRDTHRREEIKQYYRSFLWSLVFTVPVFLLSMVLMYIPGIKHGLETKVVNMLNVGQLLRWVLSTPVQFIIGQRFYSGSYKALRRGSANMDVLIALGTNAAYFYSVYSVLRAATSPHFEGTDFFETSAMLISFILLGKYLEVFAKGKTSNAIAKLMNLTPDTATLLTLDDEGNAINEEEIDSRLIQKNDMIKIIPGAKVASDGSVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNENGVLHVRATRVGSESALSQIVRLVESAQLAKAPVQKFADRISKYFVPLVILISFTTFLAWFLAGRFYAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVSCIVFDKTGTLTNGKPVVVNTKLLTNMVLQEFYELIAAAEVNSEHPLAKAIVEYAKKFKDEESPAWPEARDFVSITGHGVKATVRNKEILVGNKSLLSDHNIVVTADAEDILAETEGMAQTGILVSINGRVAGVIAISDPLKTGAQEVISILKSMNIRSIMVTGDNWGTANSIAREVGIEDVIAESKPDQKAEKVKELQASGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDKLEIRGISIDVKIEDIPMMFIQSRGKDIYGIQNLAQKHDYTQSHDATKLDSSLCFLLNALRVASCLAETQQHRHFLRHSSKHFLSISKAHFRHSQVSSSSIPVIVRFSRPLSLIVRSDHSMATSSKNGSIYDFTVKDAKGNDVNLGDYKGKVLLIVNVASQCGLSNSNYTELNQLYEKYKDKGLEILAFPCNQFGSQEPGSNEQILEVTCTRFRAEFPIFEKVNVKGDNAAPLYKFLKSSKGGIFGSGIKWNFSKFLVDKEGNVIDRYAPTTSPLSIEKDIRKLLGA 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0977 1262 ProSiteProfiles Glutathione peroxidase profile. 1095 1262 IPR000889 GO:0004602|GO:0006979
Bisa11g0977 1262 CDD HMA 129 191 IPR006121 GO:0046872
Bisa11g0977 1262 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872
Bisa11g0977 1262 Pfam Heavy-metal-associated domain 129 189 IPR006121 GO:0046872
Bisa11g0977 1262 FunFam Probable copper-transporting ATPase HMA5 767 913 - -
Bisa11g0977 1262 FunFam ATPase copper transporting beta 121 195 - -
Bisa11g0977 1262 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 981 - -
Bisa11g0977 1262 CDD GSH_Peroxidase 1104 1256 IPR000889 GO:0004602|GO:0006979
Bisa11g0977 1262 Pfam Glutathione peroxidase 1105 1213 IPR000889 GO:0004602|GO:0006979
Bisa11g0977 1262 ProSiteProfiles Thioredoxin domain profile. 1099 1261 IPR013766 -
Bisa11g0977 1262 ProSiteProfiles Heavy-metal-associated domain profile. 125 191 IPR006121 GO:0046872
Bisa11g0977 1262 NCBIfam heavy metal translocating P-type ATPase 365 965 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bisa11g0977 1262 SFLD p-type atpase 634 908 IPR044492 -
Bisa11g0977 1262 Gene3D - 420 542 - -
Bisa11g0977 1262 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Bisa11g0977 1262 SUPERFAMILY Calcium ATPase, transduction domain A 452 538 IPR008250 -
Bisa11g0977 1262 ProSiteProfiles Heavy-metal-associated domain profile. 200 266 IPR006121 GO:0046872
Bisa11g0977 1262 FunFam Glutathione peroxidase 1096 1262 - -
Bisa11g0977 1262 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Bisa11g0977 1262 FunFam Copper-transporting ATPase 1, putative 420 542 - -
Bisa11g0977 1262 Gene3D - 200 262 - -
Bisa11g0977 1262 CDD P-type_ATPase_Cu-like 291 966 - -
Bisa11g0977 1262 FunFam Copper-transporting ATPase HMA5 46 117 - -
Bisa11g0977 1262 Pfam E1-E2 ATPase 433 630 - -
Bisa11g0977 1262 PRINTS P-type cation-transporting ATPase superfamily signature 879 891 - -
Bisa11g0977 1262 PRINTS P-type cation-transporting ATPase superfamily signature 781 792 - -
Bisa11g0977 1262 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Bisa11g0977 1262 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Bisa11g0977 1262 PRINTS P-type cation-transporting ATPase superfamily signature 803 813 - -
Bisa11g0977 1262 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Bisa11g0977 1262 ProSitePatterns Glutathione peroxidases signature 2. 1162 1169 IPR029760 -
Bisa11g0977 1262 Pfam haloacid dehalogenase-like hydrolase 649 870 - -
Bisa11g0977 1262 SUPERFAMILY HMA, heavy metal-associated domain 123 196 IPR036163 GO:0046872
Bisa11g0977 1262 SUPERFAMILY HMA, heavy metal-associated domain 196 263 IPR036163 GO:0046872
Bisa11g0977 1262 NCBIfam copper ion binding protein 50 112 IPR006122 GO:0005507
Bisa11g0977 1262 NCBIfam copper ion binding protein 129 190 IPR006122 GO:0005507
Bisa11g0977 1262 ProSiteProfiles Heavy-metal-associated domain profile. 47 113 IPR006121 GO:0046872
Bisa11g0977 1262 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase 1 signature 149 170 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Bisa11g0977 1262 SUPERFAMILY Thioredoxin-like 1104 1261 IPR036249 -
Bisa11g0977 1262 Gene3D - 736 787 IPR023299 GO:0000166
Bisa11g0977 1262 Gene3D - 659 735 IPR023299 GO:0000166
Bisa11g0977 1262 CDD HMA 51 113 IPR006121 GO:0046872
Bisa11g0977 1262 ProSitePatterns Heavy-metal-associated domain. 131 160 IPR017969 GO:0046872
Bisa11g0977 1262 SUPERFAMILY HMA, heavy metal-associated domain 45 116 IPR036163 GO:0046872
Bisa11g0977 1262 Gene3D - 125 197 - -
Bisa11g0977 1262 Gene3D - 46 119 - -
Bisa11g0977 1262 Gene3D Glutaredoxin 1096 1261 - -
Bisa11g0977 1262 SUPERFAMILY Calcium ATPase, transmembrane domain M 397 933 IPR023298 -
Bisa11g0977 1262 CDD HMA 203 262 IPR006121 GO:0046872
Bisa11g0977 1262 NCBIfam HAD-IC family P-type ATPase 405 939 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa11g0977 1262 SUPERFAMILY HAD-like 651 962 IPR036412 -
Bisa11g0977 1262 Gene3D - 619 913 IPR023214 -
Bisa11g0977 1262 SFLD C1.7: P-type atpase like 634 908 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase signature 833 850 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase signature 402 421 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase signature 422 440 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase signature 350 369 - -
Bisa11g0977 1262 PRINTS Copper-transporting ATPase signature 561 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0977 Bisa-ChrBisa11 26363311 26372010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0977 1 985 Primary Pumps ATPases AT1G63440 75.428 0.0 1534