Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0964 ATGGTACCAGAGAACCTGAAGAAACAACTTGCTTTGGCTGTGAGAAGCATTCAATGGAGCTACGCAATCCACTGGTCTGGTTCAGCTAGCCAACCCGGGGTGTTGGAGTGGGGTGAAGGTTATTACAATGGGGACATAAAGACCAGGAAAACAAGCCAAGCAGTAGAACTTAACTCTGATAAAATAGGTTTGCAGAGAAGCGAACAGCTTAGAGATCTATACGAGTCTCTCGCAATTGCAGAGTCTAGTCCTCAAACTAAAAGGCCTTCGGCTGCACTATCCCCCGAAGATCTCACTGATACAGAGTGGTATTACTTGGTCTGCATGTCTTTCATGTTCAACATTGGCCAAGGGTTACCGGGAAGAACTCTAATGAATGGCCAACCCATTTGGCTGTACAGTGCCCATTTTGCTGATAGTAGAATTTTTAGTCGCTCCCTGCTGGCAAAGACAGTGGTGTGCTTTCCTTTTCTGCAAGGTGTTCTTGAGCTTGGTACAACTGATCTGGTCCCAGAAGACCTCAGTCTAATTCAGCGCCTCAGAACTTCTTTCTTGGATATTTTAGACCCGAAAGTTCACGAGAAGTCTGGAGTTGCATTAAATACAAAAAACCACAAAGATGTTGCTTGGGAAGTATTTGATCCCAATGCTTTTGATGGAAAATTAACTCCAGCATTAGGATATGAAGAAGCAAATCCAACTTCTCCCAGTAGTAGCTCAAATGCACTTCAAGCCAATCAACCAGCGGACGAGACATTCATGGTTGAAAGGATCAGTGGCGGTGCTTGGCAAGTGATGGAGGATGAACTGTGTAATTGTGTCCTTAACTCCATGAATACTAGTGACTGCATATCTCAAACTTTTGCTGGTCCTGAAAAGAATGCTTCTGTTCCCAAGGGTAATAGCCATTGTGGGCAAGATCTTCAAGAGTGCAAAAACACAAAAACGACCCTAGTGGACGTTCGAAGTGATGATTGGCATTATCAGAGCGTTCTTTCTGCTCTTCTTAAAAGCTCGGACCAGCTAAGTATGGGAGTGCATTTTCAAAGTTCTCATCGCGAATCCAGCTTTGTTAGTTGCAAGAAAGTAGGATCAATGGGTTGTCAATGGCCAAGAGGAGGAATCCAACAAAATGTATTGAAGAAGATATTGTTTGAAGTTCCTCGGATGCACATAGATTGGCTGCTTGAGTTTCAAGAAGAAAATGACTATAAAGAGGGAGCGAGACCTGAGGCTGATGAAATTGGCATGAACCATGTATTGTCAGAAAGAAGGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTTAGATCAATGGTCCCTTCAATTACTAAGGATGACAAAGTTTCAATTCTGGACGAGGCAATAGAATATCTTAAAAGGCTGGAGAAAAAGGTGAGAGAGTTAGAAGCTCGAAAGGAGTTGAAAGATTTAGGGAATAGAACTAAAAGAGCACCTCAAGATGTGGTGGAGAGGACATGTGATAATTACTGTAACAATAACAGAACTGGTAATGGCAAGAAGCCAGTGGTAAACAAGAGGAAGGCTTGTGACATTGAAGAGATAGAGAGAGAGATTGATGCAGTTCCTCTAAAAGATCATTCTAATGATGTTACTGTTAGCATGCGCAGAAATGAGGTTTTGATTGAAATGAAGTGTCCTTGGAGGGAAGGAGTTCTGCTGGAAATAATGGAAGCAGTCAGCAGTCTCCACTTAGATTCTCATTCAGTTCAGTCATCAGAAGCTGATGGGAACCTTTATCTTACTATGAAATCGAAGTTAAGAGGACCAGCGTTTGCCTCAACAGAAAAGATCAAACAAGCACTCCTCAAGGCGGCTTGGAAGTGTTGA 1854 0.4261 MVPENLKKQLALAVRSIQWSYAIHWSGSASQPGVLEWGEGYYNGDIKTRKTSQAVELNSDKIGLQRSEQLRDLYESLAIAESSPQTKRPSAALSPEDLTDTEWYYLVCMSFMFNIGQGLPGRTLMNGQPIWLYSAHFADSRIFSRSLLAKTVVCFPFLQGVLELGTTDLVPEDLSLIQRLRTSFLDILDPKVHEKSGVALNTKNHKDVAWEVFDPNAFDGKLTPALGYEEANPTSPSSSSNALQANQPADETFMVERISGGAWQVMEDELCNCVLNSMNTSDCISQTFAGPEKNASVPKGNSHCGQDLQECKNTKTTLVDVRSDDWHYQSVLSALLKSSDQLSMGVHFQSSHRESSFVSCKKVGSMGCQWPRGGIQQNVLKKILFEVPRMHIDWLLEFQEENDYKEGARPEADEIGMNHVLSERRRRAKLNERFLTLRSMVPSITKDDKVSILDEAIEYLKRLEKKVRELEARKELKDLGNRTKRAPQDVVERTCDNYCNNNRTGNGKKPVVNKRKACDIEEIEREIDAVPLKDHSNDVTVSMRRNEVLIEMKCPWREGVLLEIMEAVSSLHLDSHSVQSSEADGNLYLTMKSKLRGPAFASTEKIKQALLKAAWKC 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0964 617 MobiDBLite consensus disorder prediction 230 246 - -
Bisa11g0964 617 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 184 IPR025610 -
Bisa11g0964 617 SMART finulus 420 469 IPR011598 GO:0046983
Bisa11g0964 617 Gene3D - 412 479 IPR036638 GO:0046983
Bisa11g0964 617 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 414 463 IPR011598 GO:0046983
Bisa11g0964 617 Pfam Helix-loop-helix DNA-binding domain 418 464 IPR011598 GO:0046983
Bisa11g0964 617 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 416 476 IPR036638 GO:0046983
Bisa11g0964 617 Coils Coil 453 480 - -
Bisa11g0964 617 MobiDBLite consensus disorder prediction 224 246 - -
Bisa11g0964 617 PANTHER TRANSCRIPTION FACTOR TT8 2 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0964 Bisa-ChrBisa11 26177060 26180441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0964 2 617 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 49.390 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g0964 bHLH-MYC_N 2.3e-44 CL0161