Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0960 ATGTGCTTCCCAAAGGCCGTCACTTTCCCAACGGTCGCCAGACGGCCATTTCTTCTGCGCCCTTCAATCTTACATGTGGCTGTGATTTTTGTACTGTTGAAATGTTCCTTTCCCATTTTGCCCTCGCACCCACCTTCTCAAGACTCAAAGCTTACCCTAAATTGTTCAAAAATAAATAATAAGGTCGTTCTGAGTTATCTGAAAGAAAGCAGGTCACCTTTGTTCTCTGTGAGTGCACTAACGATGGACAAGGAAGAAGATGTAAAGGTGGGAGCCCAAAAATTCTCGGAGAGGCAGCCGCTGGGGACGGCGGCTCAGACCGACAAGGACTACAAGGAACCACCACCGGCTCCGTTGTTCGAGCCAGGGGAGCTCAAGTCCTGGTCATTTTACAGAGCAGGCATTGCCGAGTTCGTCGCCACCTTCCTGTTCCTCTACATCACCATCTTGACCGTCATGGGCGTCAAGAGATCCGCCAAGTGTGCCTCCGTCGGCGTCCAAGGCATTGCCTGGGCTTTCGGTGGCATGATCTTCGCCCTCGTCTACTGCACCGCCGGAATCTCAGGTGGACATATCAATCCGGCGGTGACGTTTGGGCTGTTTCTGGCGAGGAAGCTGTCTCTGACGAGAGCAGTGTTCTACATGGTGATGCAGTGTCTGGGAGCGATATGTGGGGCTGGAGTGGTGAAGGGTTTTGAGGGGAGTGCTCACTATGAGATGTACAAAGGTGGAGCCAACATGGTGAGCCATGGATACACCAAGGGTGATGGTCTTGGGGCTGAGATTGTTGGCACTTTCGTCCTTGTCTACACTGTCTTCTCTGCCACTGATGCTAAGAGAAACGCCAGAGATTCTCATGTTCCTATTTTGGCCCCTCTTCCCATTGGGTTTGCTGTGTTCTTGGTGCACTTGGCGACCATTCCAATCACAGGAACAGGCATCAACCCAGCAAGGAGCCTTGGCGCCGCCATCATCTTCAACAGAGACATTGCATGGGATGATCAATGGATTTTCTGGGTTGGACCTTTCATTGGAGCGGCTCTCGCTGCTCTATATCACCAGATAGTCATTCGAGCCATTCCTTTTAAGACTAGGGCTTGA 1101 0.5159 MCFPKAVTFPTVARRPFLLRPSILHVAVIFVLLKCSFPILPSHPPSQDSKLTLNCSKINNKVVLSYLKESRSPLFSVSALTMDKEEDVKVGAQKFSERQPLGTAAQTDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVKRSAKCASVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSAHYEMYKGGANMVSHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNRDIAWDDQWIFWVGPFIGAALAALYHQIVIRAIPFKTRA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0960 366 ProSitePatterns MIP family signature. 191 199 IPR022357 -
Bisa11g0960 366 Pfam Major intrinsic protein 124 353 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 FunFam Probable aquaporin PIP1-2 117 366 - -
Bisa11g0960 366 NCBIfam MIP family channel protein 136 353 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 SUPERFAMILY Aquaporin-like 124 358 IPR023271 -
Bisa11g0960 366 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 93 361 IPR034294 -
Bisa11g0960 366 PRINTS Major intrinsic protein family signature 132 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 PRINTS Major intrinsic protein family signature 336 356 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 PRINTS Major intrinsic protein family signature 173 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 PRINTS Major intrinsic protein family signature 210 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 PRINTS Major intrinsic protein family signature 260 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 PRINTS Major intrinsic protein family signature 296 318 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 CDD MIP 132 356 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0960 366 Gene3D Glycerol uptake facilitator protein. 117 364 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0960 Bisa-ChrBisa11 26103637 26108346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0960 84 366 Major Intrinsic Protein MIP AT3G61430 85.563 3.15e-172 479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0960 11 26103637 26108346 Bisa11g0960 11 26103637 26108346 ECH