Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0948 ATGGGCGGTTGCTGTTGTTGTTCTTCCAAAGAAACAGAGTTGAGCGCTCCACCAGCATACTACTATTACCCAAGAGCATTAGAGGAGCATGTTCCACAATCATCTCATCATGGTTCTGCCTCTGCTTTCTCCAGAGGGCTCCTAGTTGATACTAATCTTGAAACTTCAAGTCCTGATACTTATAGACCACCTCCTGCTCCTATCCCTTACAGCGTTACTTTGGTTGTCACTCCAACTCCACCCGGGGCTCATGAAACTAGTGATGATAAGGCTCATGCATCCCTGCATTCTACAAATCCTAATTTAGTTCAAGGAACAGTTCCTAATGATAGTCATGGAACCTTAGCTAAATTGGAAGAGCCGAAGGAATCAGAGTGCAAAGTTCATAGTGATTTAGAGCTGGAGTCAGCAAAGGACTCAGAAATCGAACTTCAAAAGTTGGCAGAATCTATCAATTTAGCAGAAGAGGAGGATGCATGTCCAATCTGTTTAGAAGAGTATGACGCTGAGAATCCAAAACTCAACATAAAATGTGACCATCATTTTCACCTTGCATGCATTCTGGAATGGAGGGAAAGAAGTGAAACCTGTCCTGTGTGCGATCAGGATATGGTTTTCGACCCTCCAATTGATTAA 636 0.4308 MGGCCCCSSKETELSAPPAYYYYPRALEEHVPQSSHHGSASAFSRGLLVDTNLETSSPDTYRPPPAPIPYSVTLVVTPTPPGAHETSDDKAHASLHSTNPNLVQGTVPNDSHGTLAKLEEPKESECKVHSDLELESAKDSEIELQKLAESINLAEEEDACPICLEEYDAENPKLNIKCDHHFHLACILEWRERSETCPVCDQDMVFDPPID 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0948 211 Coils Coil 137 157 - -
Bisa11g0948 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 206 IPR013083 -
Bisa11g0948 211 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 36 207 - -
Bisa11g0948 211 ProSiteProfiles Zinc finger RING-type profile. 160 201 IPR001841 -
Bisa11g0948 211 Pfam Ring finger domain 159 200 IPR001841 -
Bisa11g0948 211 SMART ring_2 160 200 IPR001841 -
Bisa11g0948 211 FunFam Putative E3 ubiquitin-protein ligase RHB1A 137 205 - -
Bisa11g0948 211 SUPERFAMILY RING/U-box 154 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0948 Bisa-ChrBisa11 25809271 25811591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0948 1 211 C3H Transcription Factor Family AT5G41350 53.488 1.44e-66 202