Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0946 ATGAATGCGTCCAACGCGAGTCCCACCCCACCTTGCTGTGTTGCAATGTCTCCTTCATCACGTGACTCCAAATCTCCTGTGAGAGGCCATCGATCGAGGTCACGATCGTTACCTAGGTCCAGGAGGAGTCGCTCCAGGAGTCAAGAACCACCAGATGCATCAAATCCTGGAAATAATTTGTATGTAACAGGCTTGTCTACAAGAGTCACTAACAGTGATCTTGAAAATTATTTTGGCAAAGAAGGAAAGGTTGTTGATTGCCACCTTGTTACAGATCCTCGGTCCAAAGAGTCTCGTGGATTTGGTTTTGTTACTATGGAAACTGTTGAGGATGCCAATCGATGTATCAAGTACCTGAATCACTCTGTTTTTGAAGGCAAAGAGAAAACGTGGCAGGACTCCAACTCTAGTTATTCTCTGAAAAGCTATTTTGTCTACTTTTGCCATTGCTTTGGGTTGGGGCTTCGGGCTTTAGCAGGACATGGAAGGAGACGATCCTGTAGTCACTCGCCTAGGCGTTGGCAGGACAGAGATAATTATTTGAGGGACCAACGAGGGAGATCTCGTTCCCCATATAGGAGGATGGATAACTATTCTGACTCGTATAGGAGGCGAAGGGAACGTTCATTGTCAGCTGGTGATAGTCGTTATCCAAGATGA 660 0.4606 MNASNASPTPPCCVAMSPSSRDSKSPVRGHRSRSRSLPRSRRSRSRSQEPPDASNPGNNLYVTGLSTRVTNSDLENYFGKEGKVVDCHLVTDPRSKESRGFGFVTMETVEDANRCIKYLNHSVFEGKEKTWQDSNSSYSLKSYFVYFCHCFGLGLRALAGHGRRRSCSHSPRRWQDRDNYLRDQRGRSRSPYRRMDNYSDSYRRRRERSLSAGDSRYPR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0946 219 MobiDBLite consensus disorder prediction 178 219 - -
Bisa11g0946 219 Gene3D - 15 137 IPR012677 -
Bisa11g0946 219 MobiDBLite consensus disorder prediction 178 213 - -
Bisa11g0946 219 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 60 128 IPR000504 GO:0003723
Bisa11g0946 219 CDD RRM_SF 60 128 - -
Bisa11g0946 219 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 46 209 - -
Bisa11g0946 219 SMART rrm1_1 59 129 IPR000504 GO:0003723
Bisa11g0946 219 MobiDBLite consensus disorder prediction 1 23 - -
Bisa11g0946 219 SUPERFAMILY RNA-binding domain, RBD 25 127 IPR035979 GO:0003676
Bisa11g0946 219 MobiDBLite consensus disorder prediction 1 62 - -
Bisa11g0946 219 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 58 136 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0946 Bisa-ChrBisa11 25778655 25786392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0946 59 128 Eukaryotic Initiation Factors Gene Family AT4G34110 41.429 6.95e-11 59.3