Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0941 ATGGGATTTCCAGTGGGCTACTCGGAGGTCATCTTCCCGAAGATATTCCTCCACGTGCTTTCTGTGCTGGGTCTGGTGCGAAGCCTCATCACCGTCCTCTTCCGCTATCTGGGCATCCACGATTTCCTCGAGCCGGACATTGCGTGGGCCGACCCTGCTACACAGATGCCGGAGTTTCAGTCGGTATCGGCGTTGCTGATCCGTGAAATCCTGCCGGTGGCGAAGTTCTCCGACCTGGTGGACCCGCCGGAGAGCTGCGCCGTCTGCCTCTTCGAGTTCCAGAAAGACGACGAGATCCGACGCCTCACGAACTGCAGGCACATATATCACAGGGGGTGTCTGGACCGTTGGATGGGATACGACCAGAGAACGTGCCCTCTGTGTCGCACGCCGTTCATTCCTCACGATATGCAAGGAGCCTTCAATGAGAGGCTCTGGGCTGCTTCTGGCATTCCTGAATTCTACACTAATTTTTCTGAGGATTACTCTCTGGTTAATAGTTTGTAG 507 0.5542 MGFPVGYSEVIFPKIFLHVLSVLGLVRSLITVLFRYLGIHDFLEPDIAWADPATQMPEFQSVSALLIREILPVAKFSDLVDPPESCAVCLFEFQKDDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQGAFNERLWAASGIPEFYTNFSEDYSLVNSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0941 168 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Bisa11g0941 168 SUPERFAMILY RING/U-box 66 135 - -
Bisa11g0941 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 132 IPR013083 -
Bisa11g0941 168 SMART ring_2 86 128 IPR001841 -
Bisa11g0941 168 Pfam Ring finger domain 85 129 IPR001841 -
Bisa11g0941 168 CDD RING-H2_RHA1-like 86 132 - -
Bisa11g0941 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 22 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0941 Bisa-ChrBisa11 25656739 25657245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0941 1 150 C3H Transcription Factor Family AT1G63840 58.710 1.70e-62 188