Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0938 ATGGTAACATCATCAGCTGGGTTCTGTTACTCGGATGCATCATCATCAGGAGGGAACCCAACAACCCATGTGGTGAATAATCAGATCCAAGGCTTCGTGTCGGACTCTGAGATGTTTAACCTCACTACAGGTATGGACCTGATAGGGTTCTCAAGGAATCTTCACCAACACAGTGATTGGAAGAGTACTAGTTTTTTGGCGAAACCAGATGCTCATCATCCTGGTCCTTCCTCTTCCACCAATTTCTATTACCATGACTTCAATAAGAAAGATTTCCCATCTGGGATTTCTGGCCAGAATCTGTTGGTTGGAGCTCATGATTGGCAACACAACAGACTACTTGTTGATGATTCCTCTTCTCTAAGGTTTGCCTTCCCTTGCGAACCTGCTGAAAGGCCTACTCAAGGCCTTTCTCTGTCTCTTTGTTCTACCAATCCTTCTGGTATTGGCTTACAATGTTTCGAACAAAGAAACAACAGTAACAATCATCTGCAACAAGAGGACTTTGTTTCTTCAAGTTCAAGAGAGGTGTTCTTTGGAAAATCACCCTATACTGAACATGGGTATTTGGGTAAAACTGAAAATTTGTACCAAGAAAATTTCCTGCTCGAGAACTCCAAGTATTTACTCCCTGCACAGCAGCTTCTCAACGAGTTTTGCAGTCTAGAAACGAAACAAAGTGAAATAGTAAAACAAAAGTCTCACAAGAGCAAGCAGTTGGAAGATGATAACAGTATTAGTCCATCTAAGAAGCACCCTGTTACCTCCCTAGATTTCGTAGAATTACAGAAGAGGAAGACAAAGTTGCTTTCGATGCTAGAAGAGGTTGACAGAAGATACAGACACTACTGCAATCAGATGAAGGCAGTGGTATCTTCATTTGAAGCAGTGGCAGGGAATGGGGCTGCAACAGTATACTCGTCTCTGGCCTTGAAAGCGATGTCGAGGCATTTCAAGTGTCTGAAAGATGGGATAATGGATCAGCTTCAGGATACAAGGAAAGCCATGGGTGAGAAAGATGGAGTTGCAGTAGGTGCCACAAGAGGCGAAACTCCAAAGCTCAAAGTCATCGATCAAGCCGTGAGGCAACAGAGAGCCTTCCAGCAAATGGGAATGATGGAGTCACATCCATGGAGACCCCAACGTGGCCTTCCCGAACGATCTGTCACCCTTCTTCGTGCTTGGCTTTTCGAGCATTTTCTCAACCCGTACCCAAGCGATGCTGACAAACATATTTTAGCACGCCAAACCGGCCTCTCAAGAAGCCAGGTATCAAATTGGTTTATAAATGCGAGGGTAAGGCTATGGAAGCCAATGATAGAAGAGATGTACGAAAAAGAAGTGAAAGAGCAAGAAGGCAACATTGGCTCTTCAGTTGATCATGATCCCGCCGGCAGCAACAGCCGAAACATAGAGAAGTTGCCTCCGATGAGAGCTGAAGATGAGAAGGGAACGGTGGAGCGTGTATGTACGACGTCATCCAGCATGAACAACCAAAAGAGCCGGGAAGAACAGTGCCTGGGGATGAGGACGACGTCGTTCGGGTCGGGGGAGCTTGATTTTTCAGCGTATAGGAATACGACAAGTGAGTCATCGGGCGGCATGGTCGGGTTCAGCAACGAGAACTATAGGAGGGGACAGGGTGGAGTGTGCCTGACGCTAGGGTTACAGCAGGATGATGGTGGAAGCAGAATCCACGAGTATGAGGCAGAGGCAGTTCAGTACTCGCTTTTGGACGGTCAACCCCAGAGTCTACCTTCCTACACACATTTCATGGCCTCACACTTACTTCATGACTTGGCTGGTTGA 1809 0.4638 MVTSSAGFCYSDASSSGGNPTTHVVNNQIQGFVSDSEMFNLTTGMDLIGFSRNLHQHSDWKSTSFLAKPDAHHPGPSSSTNFYYHDFNKKDFPSGISGQNLLVGAHDWQHNRLLVDDSSSLRFAFPCEPAERPTQGLSLSLCSTNPSGIGLQCFEQRNNSNNHLQQEDFVSSSSREVFFGKSPYTEHGYLGKTENLYQENFLLENSKYLLPAQQLLNEFCSLETKQSEIVKQKSHKSKQLEDDNSISPSKKHPVTSLDFVELQKRKTKLLSMLEEVDRRYRHYCNQMKAVVSSFEAVAGNGAATVYSSLALKAMSRHFKCLKDGIMDQLQDTRKAMGEKDGVAVGATRGETPKLKVIDQAVRQQRAFQQMGMMESHPWRPQRGLPERSVTLLRAWLFEHFLNPYPSDADKHILARQTGLSRSQVSNWFINARVRLWKPMIEEMYEKEVKEQEGNIGSSVDHDPAGSNSRNIEKLPPMRAEDEKGTVERVCTTSSSMNNQKSREEQCLGMRTTSFGSGELDFSAYRNTTSESSGGMVGFSNENYRRGQGGVCLTLGLQQDDGGSRIHEYEAEAVQYSLLDGQPQSLPSYTHFMASHLLHDLAG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0938 602 CDD homeodomain 378 439 IPR001356 GO:0003677
Bisa11g0938 602 MobiDBLite consensus disorder prediction 231 248 - -
Bisa11g0938 602 SMART HOX_1 378 442 IPR001356 GO:0003677
Bisa11g0938 602 Gene3D - 372 453 - -
Bisa11g0938 602 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 140 477 - -
Bisa11g0938 602 SUPERFAMILY Homeodomain-like 379 445 IPR009057 -
Bisa11g0938 602 Pfam Associated with HOX 203 325 IPR006563 -
Bisa11g0938 602 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677|GO:0006355
Bisa11g0938 602 FunFam BEL1-like homeodomain protein 4 381 443 - -
Bisa11g0938 602 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677
Bisa11g0938 602 SMART prehox3 197 327 IPR006563 -
Bisa11g0938 602 MobiDBLite consensus disorder prediction 451 475 - -
Bisa11g0938 602 MobiDBLite consensus disorder prediction 231 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0938 Bisa-ChrBisa11 25620297 25623098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0938 111 601 Homeobox Transcription Factor Family AT5G41410 43.088 3.59e-116 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa11g0938 POX 1.2e-45 No_clan