Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa11g0899 | ATGGGCACTTGCAGCAGCATGCCCTCCGCCCGGACCCAGCTCAATTCCGACGGTCCCCACTCCGACGGACCTCCCAATGGCCTCTCCGTCCTCCCTCCCAATTCCAAGCCCTCTCCTCCTAGACCCCCTCTCTCCGCCGCCCTCGGCAGCGTCCTCCGCCGCCCCATGGAGGACGTTCGCTCCACCTACATCTTCGGCCGCGAACTCGGTCGCGGTCAATTTGGCGTTACCTATTTGGTCACCCACAAAGTCACTGAGCAGCAATTCGCCTGCAAATCCATCGCCACTCGCAAACTCATTAACCGCGACGATATCGATGACATTCGCCGCGAGGTCCAGATCATGCACCACCTCACCGGTCATCGCAACATTGTGGAGCTTAAGGGAGCTTACGAGGACCGCCACTCTGTCAATTTAATCATGGAGCTCTGCGCCGGCGGGGAGCTCTTCGATAGAATCATAGCCAAGGGCCATTACTCGGAGCGCGCCGCAGCGAACTTGTGTCGCCAGATCGTCACGGTGGTGCACAATTGTCACACCATGGGAGTGTTTCATAGGGATTTGAAGCCTGAGAATTTCTTGTTCCTGAGTAAAGACGAGAATTCGCCTCTTAAGGCCACTGATTTTGGCCTCTCTGTGTTTTTCAAGACAGGAGACATATTTAGAGATCTTGTTGGGAGTGCATATTATGTTGCACCTGAGGTGCTGCGTAGAAGTTATGGACCTGAAGCTGATATTTGGAGTGCCGGGGTTATATTATACATTCTGCTCTCTGGTGTCCCGCCCTTTTGGGCTGAAAATGAACAGGGTATCTTTGATGCTGTTCTTCGTGGACATATTGATTTTATATCAAAGCCTTGGCCTTCCATATCAAGTAGCGCAAGAGATTTGGTTAAAAATATGCTACGAGCTGACCCTAGAGAACGGCTTTCAGCTGTTGGTGTCCTTAATCATCCTTGGATGAGAGAAGATGGGGAAGCATCTGATAAACCTCTTGATATTGCTGTTTTGACCAGAATGAAACAATTCCGGGCAATGAACAAACTAAAGAAAGTAGCTCTGAAGGTAATTGCAGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAAATGTTCAAATCCATGGACACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTGGGTAGTAAGCTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTAGATGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACATGAATAGGATGGAAAGAGAGGACCACATATATAAAGCATTTGAATATTTTGACAAGGACAAGAGCGGGTATATCACAAAGGAAGAGTTGGAATATGCACTTAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATTGCCGAAGTTGACGCAGACAATGACGGAAGAATTAACTATGAGGAGTTTGTAGCCATGATGAGAAAAGGCAACCCAGAACTGGTTACCAACAACAGACGTCGTAAATAA | 1548 | 0.4722 | MGTCSSMPSARTQLNSDGPHSDGPPNGLSVLPPNSKPSPPRPPLSAALGSVLRRPMEDVRSTYIFGRELGRGQFGVTYLVTHKVTEQQFACKSIATRKLINRDDIDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVVHNCHTMGVFHRDLKPENFLFLSKDENSPLKATDFGLSVFFKTGDIFRDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAVLRGHIDFISKPWPSISSSARDLVKNMLRADPRERLSAVGVLNHPWMREDGEASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHIYKAFEYFDKDKSGYITKEELEYALKKYNMGDEKTIKEIIAEVDADNDGRINYEEFVAMMRKGNPELVTNNRRRK | 515 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa11g0899 | 515 | FunFam | Calcium-dependent protein kinase 1 | 329 | 504 | - | - | |
| Bisa11g0899 | 515 | Pfam | Protein kinase domain | 65 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa11g0899 | 515 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
| Bisa11g0899 | 515 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 329 | IPR011009 | - | |
| Bisa11g0899 | 515 | SUPERFAMILY | EF-hand | 360 | 501 | IPR011992 | - | |
| Bisa11g0899 | 515 | CDD | STKc_CAMK | 63 | 320 | - | - | |
| Bisa11g0899 | 515 | ProSitePatterns | EF-hand calcium-binding domain. | 377 | 389 | IPR018247 | - | |
| Bisa11g0899 | 515 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 59 | 496 | - | - | |
| Bisa11g0899 | 515 | SMART | efh_1 | 440 | 468 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | SMART | efh_1 | 475 | 503 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | SMART | efh_1 | 368 | 396 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | SMART | efh_1 | 404 | 432 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 400 | 435 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 436 | 471 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 329 | - | - | |
| Bisa11g0899 | 515 | ProSitePatterns | EF-hand calcium-binding domain. | 449 | 461 | IPR018247 | - | |
| Bisa11g0899 | 515 | ProSitePatterns | EF-hand calcium-binding domain. | 413 | 425 | IPR018247 | - | |
| Bisa11g0899 | 515 | SMART | serkin_6 | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa11g0899 | 515 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 148 | - | - | |
| Bisa11g0899 | 515 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524 | |
| Bisa11g0899 | 515 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 183 | 195 | IPR008271 | GO:0004672|GO:0006468 | |
| Bisa11g0899 | 515 | Pfam | EF-hand domain pair | 439 | 501 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | Pfam | EF-hand domain pair | 369 | 429 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | FunFam | calcium-dependent protein kinase 1 | 149 | 328 | - | - | |
| Bisa11g0899 | 515 | ProSiteProfiles | Protein kinase domain profile. | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa11g0899 | 515 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 364 | 399 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | Gene3D | - | 330 | 504 | - | - | |
| Bisa11g0899 | 515 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Bisa11g0899 | 515 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Bisa11g0899 | 515 | FunFam | Calcium-dependent protein kinase 1 | 65 | 148 | - | - | |
| Bisa11g0899 | 515 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 472 | 506 | IPR002048 | GO:0005509 | |
| Bisa11g0899 | 515 | ProSitePatterns | EF-hand calcium-binding domain. | 484 | 496 | IPR018247 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa11g0899 | Bisa-ChrBisa11 | 24864010 | 24870184 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa11g0899 | 49 | 513 | EF-hand Containing Proteins | AT4G23650 | 80.215 | 0.0 | 805 |
Transcription factors information