Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0862 ATGGATGATCGTCCTCCAAAACAGGCAACCTCTGAAGAAGTGAGCAGTAGTGAAAGCGAAATGATAAAGATGAGCGAGGAAGAGGAGGATCTGATCCACAGGATGTACAGCCTTGTGGGCAACAGGTGGGATTTAATAGCGGCACGCATTCCTGGTCGTAAATCAGAGGAGATACAGAGATTCTGGATTATGAAACATGGTGATGCAGATGCTGCTTTTGCCGTCAAAACAATCCAACACCAGCATAAACCCTAA 255 0.4588 MDDRPPKQATSEEVSSSESEMIKMSEEEEDLIHRMYSLVGNRWDLIAARIPGRKSEEIQRFWIMKHGDADAAFAVKTIQHQHKP 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0862 84 Pfam Myb-like DNA-binding domain 23 63 IPR001005 -
Bisa11g0862 84 Gene3D - 23 83 - -
Bisa11g0862 84 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Bisa11g0862 84 ProSiteProfiles Myb-like domain profile. 25 62 IPR001005 -
Bisa11g0862 84 MobiDBLite consensus disorder prediction 1 23 - -
Bisa11g0862 84 CDD SANT 23 62 IPR001005 -
Bisa11g0862 84 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 64 - -
Bisa11g0862 84 SMART sant 20 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0862 Bisa-ChrBisa11 23980726 23982779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0862 23 77 MYB Transcription Factor Family AT3G27920 44.828 3.74e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa11g0862 Myb_DNA-binding 1.1e-07 CL0123