Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0855 ATGCAAAGAGCTGAGGAAAATTTTCCCAGAATCATGGAGAGAGATGCACAGCTCGAGTTTCACAACGGTGCAGATATCGGGTCGTGTTTGTCAAATCTGATATTATCAGGTGGGACGAACACCTTGGATTCAATCTTCTCCAATTGCCCACCAACACACGCCACTGGCAACGCCATGTCTGAGCCTTTGGGGTCGTCGGTGTATCACCGGCAAAGGGATATTCTGCAGAAGTTCTACGAGGATAGCCGTGTGCGAAGTTTATTTGGTGGCATTTCATTGAGAGATCCCCCTCAAAACTCTGTGTGCGCAACGTCTTTAGCTACTCCCTGCAAGAAGAAACTGTACAGGGGAGTCAGACAGAGACACTGGGGAAAATGGGTCGCAGAGATAAGACTTCCACAGAACAGAATGAGAGTGTGGCTGGGCACTTACGAAACCGCCGAAGCTGCGGCTTATGCGTATGATCGTGCCGCTTATAAGCTCCGAGGCGAGTATGCGCGTCTGAATTTCCCAAATCTGAAGGACCCAGCGAAATTAGGATTCGGAGATGGGTCCAGATTGAATGCTCTGAAAACCTCCGTGGATGCCAAAATTCAGGCTATCTGCCAAAAGGTGAAGAAGGAGAAAGCCAAGAAGAGTGCAGCGAAGAAGAAGCTTAATCCTAATCCTAATCCTAATTCCACCACCCATGTCAATGGCGGTCAGAGTGAGAAAGAGAAACCCCAGAAGGTTGACTCCTCCTCTTGCTCTTCGTCCTCCTTTCCCTTGTCACCATTAACTTTCGATGATAGCTGGACGAAGGAGTTGATTTCACCGACTATTTCAGAAGATGGACTATGGAAGGGGGAGAACTCGCCGTCCTCTGTTTCAACGATGGGAGCAGAGGAATCAGACTTTTTCGAAGGGTGTTCCTTGGCGAGGATGCCTTCCTTCGATCCCGAGTTGATTTGGGAAGTCCTCGCCAATTAA 969 0.4892 MQRAEENFPRIMERDAQLEFHNGADIGSCLSNLILSGGTNTLDSIFSNCPPTHATGNAMSEPLGSSVYHRQRDILQKFYEDSRVRSLFGGISLRDPPQNSVCATSLATPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPAKLGFGDGSRLNALKTSVDAKIQAICQKVKKEKAKKSAAKKKLNPNPNPNSTTHVNGGQSEKEKPQKVDSSSCSSSSFPLSPLTFDDSWTKELISPTISEDGLWKGENSPSSVSTMGAEESDFFEGCSLARMPSFDPELIWEVLAN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0855 322 MobiDBLite consensus disorder prediction 278 294 - -
Bisa11g0855 322 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Bisa11g0855 322 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Bisa11g0855 322 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Bisa11g0855 322 MobiDBLite consensus disorder prediction 209 254 - -
Bisa11g0855 322 FunFam Ethylene-responsive transcription factor 2 113 172 - -
Bisa11g0855 322 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 55 320 - -
Bisa11g0855 322 CDD AP2 113 173 IPR001471 GO:0003700|GO:0006355
Bisa11g0855 322 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Bisa11g0855 322 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Bisa11g0855 322 Gene3D AP2/ERF domain 114 172 IPR036955 GO:0003700|GO:0006355
Bisa11g0855 322 MobiDBLite consensus disorder prediction 276 295 - -
Bisa11g0855 322 SUPERFAMILY DNA-binding domain 114 171 IPR016177 GO:0003677
Bisa11g0855 322 MobiDBLite consensus disorder prediction 219 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0855 Bisa-ChrBisa11 23906545 23907513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0855 24 322 AP2-EREBP Transcription Factor Family AT1G64380 47.324 6.41e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g0855 AP2 4.1e-13 CL0081