Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0840 ATGGCTAGCTTCTCTTTTTCCTTCGTATTCTCACTCCTACTGTTTCTCGCTCTCATACAAAGCAGTACCCAAGCATGCAAAACACGTTACTGCCCAGGTTTCGCCTTTTTCTGCGACAACCTCAACCAAACATTACTCACTCTCCCAAACGCCGGAGATTTCGTTGTCAAAAGAATCTCCGTGGACCAGCAAAGGGTTTGGATTAACGATCCACGCGATTGCCTGCCCACGCGCTTCCTGCGTGACATAGACCTCCGAGGTTCGCTTTTCCGATGGAGCAACCATTACTATGATTTTGTAAACGTCGACTTCCTCAACTGCACCACCAACGTGACAGACTCGTACTTCCCATTCGTTCACGCAATACGCTGTCTGAGCTCTGACCACCAGAGTTATTCGGTGGTGGCTGTTTTGTCGGATCCTCCGTTTGATACGAACTCGCCGATACAAGGGTGCAGGGTGATTTCTTCAGCTTGGGTTCCAGTTGATAATTTCAGACGTGAGCAACTATGGTCGTTCCTTTACTCTGACATCCAATTGCAATGGAAAGCACCAAACTGCGTGTATCCTGAAACTTCCAAAATTGTAATCTCATCGGACTCCAATCCTGATCAAGGAACTCCAAACAGTAACGTTAAATATAATTTTCCAGACTTAGATGGAAAAGTTGATAGAACGTCGAAATTGTTAGGAGTGGGAATAGGTGGAGCAATATGCCTTGTTGTGGTTTTGCTTGCACGTTTTCTAAGCTCTCGAAGAAGACAGACGACGAACACAGATTTAGAAACAAGCACGGGGCAGTCACGTGACATGAGAACGAGGCTCGGTGGGTTAACCATCGAACTGTATCCGAAAATCCAGGTTGGTCATAGTGGACGATTGCCTAACCCTAGTGACAACATTTGTTCCATATGTCTGTGTGAGTATGAGCCCATGCAGACACTTAGAACCATTCCTCACTGTAATCACTATTTTCATGCCAATTGCATTGATGGGTGGCTCAAGCTGAAGGCTACTTGCCCCTTGTGTCGATATTTACCTGTGCCTCTCAATACAAATTCCGATAATTGA 1071 0.4585 MASFSFSFVFSLLLFLALIQSSTQACKTRYCPGFAFFCDNLNQTLLTLPNAGDFVVKRISVDQQRVWINDPRDCLPTRFLRDIDLRGSLFRWSNHYYDFVNVDFLNCTTNVTDSYFPFVHAIRCLSSDHQSYSVVAVLSDPPFDTNSPIQGCRVISSAWVPVDNFRREQLWSFLYSDIQLQWKAPNCVYPETSKIVISSDSNPDQGTPNSNVKYNFPDLDGKVDRTSKLLGVGIGGAICLVVVLLARFLSSRRRQTTNTDLETSTGQSRDMRTRLGGLTIELYPKIQVGHSGRLPNPSDNICSICLCEYEPMQTLRTIPHCNHYFHANCIDGWLKLKATCPLCRYLPVPLNTNSDN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0840 356 SUPERFAMILY RING/U-box 295 347 - -
Bisa11g0840 356 ProSiteProfiles Zinc finger RING-type profile. 302 344 IPR001841 -
Bisa11g0840 356 Pfam Ring finger domain 301 344 IPR001841 -
Bisa11g0840 356 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 20 345 IPR046948 -
Bisa11g0840 356 SMART ring_2 302 343 IPR001841 -
Bisa11g0840 356 Pfam Wall-associated receptor kinase galacturonan-binding 28 70 IPR025287 GO:0030247
Bisa11g0840 356 CDD RING-H2_PA-TM-RING 302 344 - -
Bisa11g0840 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 349 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0840 Bisa-ChrBisa11 23611661 23613509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0840 33 350 C3H Transcription Factor Family AT2G25410 31.953 9.99e-34 126