Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0818 ATGGTTATTTTTACGATATGCGACGAATGTTTTGGAATTAGGATATTGTGGTCTGCTCCAAATTTTAATATAACATATTCTCAAAAGGATAATGGAATTGTGTTACATTTTTCCAATGGTTTTTCAAGACATTTGCTTGACATGATGTGTTCAGGAATTCAAATGGATCGGATCCGGATTTCGGATGCATACCAGATTACCAGGAAATATAGGCGGTGGGCCTTCCTTGCGGCCTTTGCTCCATTATATTTTATTCCCATCTCCAAATTCCAAACACCAACGCGAGTGTTGTTCCCTGGGTTTGCGAAAATGGAAGCTGAAAACAAAGAAAGAATCGAGACGGCGGTTCGGAGAATTCTGGAAGAATCGGACATGGACGTCGTCACGGAGTCCAGGATTAGGAAGCAGGCCGCCAAGGAGCTCGACCTCGACCTCTTGCAGCCGCATTACAAAGCGTTCGTGAAGCAGGTTGTGGAGTCGTTTCTTCAGGAAAAACAAGAGGAAGAGCAGCAACAGCCACAAGACGAAGCTGTTCAGGACCAGGATTATGACGATAACGGCGATCTCATCATTTGCAAGCTTTCTGACAAGAGAAGGGTGACGATTCAAGATTTCAGAGGGAAAACTTTGGTCTCCATCCGGGAGTACTATAAAAAGGATGGCAAAGAGCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGGCAGCCTTCAAGAAAAATATACCTGCCATAGAAAAAGCAATTGAGAAAATGGAGTCACAACTGTAA 777 0.4363 MVIFTICDECFGIRILWSAPNFNITYSQKDNGIVLHFSNGFSRHLLDMMCSGIQMDRIRISDAYQITRKYRRWAFLAAFAPLYFIPISKFQTPTRVLFPGFAKMEAENKERIETAVRRILEESDMDVVTESRIRKQAAKELDLDLLQPHYKAFVKQVVESFLQEKQEEEQQQPQDEAVQDQDYDDNGDLIICKLSDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQWAAFKKNIPAIEKAIEKMESQL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0818 258 Gene3D Transcriptional Coactivator Pc4; Chain A 181 258 IPR009044 GO:0003677|GO:0006355
Bisa11g0818 258 SUPERFAMILY DEK C-terminal domain 108 163 - -
Bisa11g0818 258 Pfam DEK C terminal domain 108 162 IPR014876 -
Bisa11g0818 258 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 107 256 IPR045125 GO:0003713|GO:0060261
Bisa11g0818 258 FunFam RNA polymerase II transcriptional coactivator KELP 181 257 - -
Bisa11g0818 258 Pfam Transcriptional Coactivator p15 (PC4) 192 243 IPR003173 GO:0003677|GO:0006355
Bisa11g0818 258 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 106 163 IPR014876 -
Bisa11g0818 258 SUPERFAMILY ssDNA-binding transcriptional regulator domain 191 253 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0818 Bisa-ChrBisa11 23370115 23378401 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Bisa11g0818 DEK_C 2.5e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0818 11 23370115 23378401 Bisa11g0818 11 23370115 23378401 ECH