Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0810 ATGAGTGAAGTAGGGTTTGTAGTGATTGCTGTATGCAAAATGGGGGTTTCACAAACTCCAAGTACTTCTCCAAAGCAGTATCCTCAAGAACTTCAGCTAAAGCTATATCAGGCCTTCATCTTCTCCATTCCAATTCTGTTTTCCATAATTCTGTTTCTGTTGTTCTACTTGTTCTACCTCAAGCGCAGGGCTTCCTCTCTCTCTTCCCCTCCTCATCACCTCCCTCCCACCACACCATCCTCACCCTATCATTCCTCTGCTTGTCCTTTGGATCGCACCCTCCACTTCCTTGACACGCTTCCAAAAGTTTCATTTGATGAGGAATTAAAAGCTAGAGACTCACAATGTTGTGTGTGTCTGGGAGAATTTGAGATGAAAGAAGAAGTGGTACAGATCCCTTATTGCAAGCATGTGTTTCACAAGGAATGCATATATCACTGGCTCCATTCACATTCAACATGTCCACTTTGTAGATGTTCCATCATCCCAACAATCAAGTTTCTTAATTTTCCACCTCCGCCAGCGCCGGCACCGGCGCCACCGTTCCATCCTCTTCCTCTTGCAGATGATGCCGTATAA 579 0.4508 MSEVGFVVIAVCKMGVSQTPSTSPKQYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPPHHLPPTTPSSPYHSSACPLDRTLHFLDTLPKVSFDEELKARDSQCCVCLGEFEMKEEVVQIPYCKHVFHKECIYHWLHSHSTCPLCRCSIIPTIKFLNFPPPPAPAPAPPFHPLPLADDAV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0810 192 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Bisa11g0810 192 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 22 164 - -
Bisa11g0810 192 Pfam Ring finger domain 115 158 IPR001841 -
Bisa11g0810 192 SMART ring_2 116 157 IPR001841 -
Bisa11g0810 192 CDD RING-H2_EL5-like 115 158 - -
Bisa11g0810 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 163 IPR013083 -
Bisa11g0810 192 SUPERFAMILY RING/U-box 96 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0810 Bisa-ChrBisa11 23290411 23291885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0810 23 163 C3H Transcription Factor Family AT4G10150 41.497 3.72e-34 119