Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0795 ATGAGACAAATGAAAGGAACCGAAGATAGGAAAGTATTGATGATTAAGTTGATGCTTGTGATAATAGAGGATGCACATTGGCCGAAGAAAATGGTGATGACTTGGGATGACGCCGTTGAGGGCGAAATGCATGACAGAGCAATGCAAGACGGTATGGCGGGAAAATTATTTGGCAGAAGGAAAGACGGGAAGGCGGGTCGGGTGGAACTTGGGCTAAGGCCCATTCAGCATCTTATTGCGTGGTTTGTGCAAGCCCAGACACGGGGGCAGACTCAGAGAGAGAGCGAGGGAGGGGGTTGTACTCGTGTTGTCTTTGCAGACTCCACCCAAGCCTTTGGTGTGTCGGAAGCAAGAGCCAACATCCTCCTTGAATCGCCGAACATGACAGAAGTTGCGAGCTCAGTGGTGCACGAGGTGCTTGGACGACGTATTGAGGACGTCGATGAGCCTATTATTGATTATATTATCAACGTTCTCGCTGACGAAGACTTTGATTTTGGAGTTGATGGAGAAGGGGCCTTCGAATTTCTCGGAGAGCTACTCGTCGGTGCCGGCTGCGTCGACGATTTCTCTGAATGTCGCTCTGTATGTAGCAAATTGTCTGAAAAATTTGGAAAGCATGGGTTGGTCAAAGCCAAACCAACCGTACGAAGCCTTGCAGTACCCTTCAGAATGAATGACGGAATGGATGATGGGGTAGCTCCCAAGAAGAAGCCCGAGGCTACAGATGGTCCTTTGCTATCTGAACGTGACCGAGCAAAGCTAGAAAGAAGAAAGAGGAAGGATGAGCGCCAAAGGGAGGCACAGTACCAAATGCATTTAGCGGAAATGGAAGCGGCTCGAGAAGGGATGCCTGTTGTATGTGTTAGGCATGATAATAGTGGTGGTCCAGCGGTCAAGGACATTCATATGGAGAACTTCAATATTTCTGTTGGTGGCCGTGATCTCATCGTGGATGGTTCAATCACACTTTCATTTGGAAGGCACTACGGCCTTGTTGGAAGAAATGGTACTGGGAAAACAACATTCCTCAGGCACATGGCTATGCATGCCATTGAGGGTATACCTAAAAATTGTCAGATATTGCATGTGGAACAAGAGGTGGTTGGTGATGATATAACAGCTTTGCAGTGTGTTCTTAATTCTGATATTGAGAGAACTCAACTTCTGGAAGAAGAAGTTCGTTTACTTGCTCTACAGAGAGAGTTGGAGACAGGGGATGTAAATGGAAAGAGCAATGGTAATCTGAAGGAGGCAGTTGACAGAGATGCTATTTCGCAGAGACTTGAGGAAATATACAAGAGGCTTGAATTAATTGATGCTTATTCTGCAGAATCACGTGCAGCATCGATACTTGCAGGCCTAAGCTTCACTCCTGAGATGCAAAAGAAGGCAACAAAAACTTTTTCTGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCATTATTCATAGAGCCTGATATCTTGCTTCTTGATGAACCTACGAACCATCTTGATCTTCATGCTGTCTTATGGCTGGAATCTTACTTGGTTAAGTGGCCGAAAACATTTATAGTGGTTTCTCATGCTAGAGAATTCTTGAACACGGTGGTTACTGACATAATTCACCTACAAGGCCAAAATCTGACTACATATAAAGGGAATTATGACACTTTTGAGAAGACTCGAGAAGAACAGCTAAAGAACCAGCAAAAAGCAATAGAAGCAAATGAACGTTCAAGAGCTCATATGCAGACTTTCATTGATAAGTTCCGCTATAATGCTAAGAGGGCATCACTTGTTCAATCAAGAATCAAGGCATTGGATCGAATGGGACATGTGGATGCAATTATCAATGATCCTGACTACAAGTTTGAGTTCCCAACTCCAGATGATAGACCTGGTGCACCGATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGCCCTATTCTGTTTAAGAACTTGAATTTTGGGATTGATCTTGACAGCCGAATTGCCATGGTGGGACCAAATGGCATTGGTAAATCTACTATACTTAAGTTAATTGCAGGGGAACTACAACCCAGTTCTGGGACAGTATTCCGTTCTGCCAAGGTTCGAATAGCAGTGTTCAGTCAGCATCATGTTGATGGACTAGACTTATCTTCAAATCCTCTTCTGTATATGATGCGGTGCTACCCTGGAGTTCCTGAACAGAAGCTTCGAGCTCACTTGGGTTCTTTTGGTGTTACTGGAAATCTTGCGCTTCAGCCAATGTATACGCTGTCAGGTGGCCAAAAAAGCAGGGTTGCATTTGCAAAGATAACTTTCAAGAAACCACATATAATATTGCTTGATGAACCATCCAATCACCTGGACCTGGATGCTGTTGAGGCGCTAATTCAAGGCCTTGTGATATTCCAAGGAGGCATTCTAATGGTGAGTCACGATGAGCACCTAATATCTGGAAGCGTGGAGGAACTATGGGTTGTATCCCAAGGGAGAGTGAGCCCATTCCACGGCACCTTCCAAGATTATAAGAAGATACTTCATTCATCATAG 2532 0.4483 MRQMKGTEDRKVLMIKLMLVIIEDAHWPKKMVMTWDDAVEGEMHDRAMQDGMAGKLFGRRKDGKAGRVELGLRPIQHLIAWFVQAQTRGQTQRESEGGGCTRVVFADSTQAFGVSEARANILLESPNMTEVASSVVHEVLGRRIEDVDEPIIDYIINVLADEDFDFGVDGEGAFEFLGELLVGAGCVDDFSECRSVCSKLSEKFGKHGLVKAKPTVRSLAVPFRMNDGMDDGVAPKKKPEATDGPLLSERDRAKLERRKRKDERQREAQYQMHLAEMEAAREGMPVVCVRHDNSGGPAVKDIHMENFNISVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRHMAMHAIEGIPKNCQILHVEQEVVGDDITALQCVLNSDIERTQLLEEEVRLLALQRELETGDVNGKSNGNLKEAVDRDAISQRLEEIYKRLELIDAYSAESRAASILAGLSFTPEMQKKATKTFSGGWRMRIALARALFIEPDILLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQGQNLTTYKGNYDTFEKTREEQLKNQQKAIEANERSRAHMQTFIDKFRYNAKRASLVQSRIKALDRMGHVDAIINDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVIFQGGILMVSHDEHLISGSVEELWVVSQGRVSPFHGTFQDYKKILHSS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0795 843 FunFam ATP-binding cassette sub-family F member 3 595 843 - -
Bisa11g0795 843 ProSitePatterns ABC transporters family signature. 469 483 IPR017871 GO:0005524|GO:0016887
Bisa11g0795 843 Gene3D - 256 578 IPR027417 -
Bisa11g0795 843 Gene3D - 596 842 IPR027417 -
Bisa11g0795 843 FunFam ABC transporter F family member 3 254 578 - -
Bisa11g0795 843 Pfam ABC transporter 321 497 IPR003439 GO:0005524
Bisa11g0795 843 SMART AAA_5 326 543 IPR003593 GO:0016887
Bisa11g0795 843 SMART AAA_5 658 825 IPR003593 GO:0016887
Bisa11g0795 843 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 302 565 IPR003439 GO:0005524
Bisa11g0795 843 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524|GO:0016887
Bisa11g0795 843 CDD ABCF_EF-3 302 541 - -
Bisa11g0795 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 569 IPR027417 -
Bisa11g0795 843 Pfam ABC transporter 536 617 IPR032781 -
Bisa11g0795 843 MobiDBLite consensus disorder prediction 227 267 - -
Bisa11g0795 843 MobiDBLite consensus disorder prediction 230 267 - -
Bisa11g0795 843 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 633 842 IPR003439 GO:0005524
Bisa11g0795 843 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 283 841 - -
Bisa11g0795 843 CDD ABCF_EF-3 633 825 - -
Bisa11g0795 843 Pfam ABC transporter 650 780 IPR003439 GO:0005524
Bisa11g0795 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 836 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0795 Bisa-ChrBisa11 23020343 23030174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0795 595 794 Calmodulin-binding Proteins AT2G36910 26.724 1.14e-10 63.5