Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0791 ATGGCTGGTGTTACGCCATGTTCTGGCGCTTTCCTCCTCCTAATTCCTTGTAAGTCTCTTTCTTTCTTAGGGCTTTCAGATGTCACACCATCATTCTCAGTTCTCACCATGGCTTTGGTGTTTCAAATGCCTCCAGGTCAGGTTGCTTTCACCGGCAAGCCCAGATGGATGCTCTCAGATCATTGTGAGCATGATTCTGAACTGCTTCAACAATTCTCCTCTGGGATAAAGACTATTGCTGTGATATCTGTCAGACCATGGGGGGTAGTACAATTTGGATCCACACACAAGATCCCGGAAAGTCAGGACTTTATGGAACAAACCCAAAGACTGCTCATGGGAACAGAAAATGTTCTGGATATGGTTGATGCATCACCATGGGGTTTGGAGAATTATGATCCGAATGGCTTGTTGGACTCTGAAAACTTGCTTTCTTGGACTCTCAACTCTGATGATGATATTGATGATAACTCCAAAAAGCCAAGTATGGATAATTCCTTCCCTTGGATTCACGAAGAAGGAATCATGGGGTTGCATGGAGAATCTTCCTGTGTTATTGATCAATTCACAACAGATAGGGCTGGTTCCGATGTGTTTTTGAAGCCTAATTCCACATGGGGCGGTGAAGTTTCTTCTTTGGCTTCATCAGGGGCTCAAGATGTTACCCCTGAGGATTCAGCATTGACCTCTTTGCACAGCATGAACACAGGAGGGACATTTCAGTCTAACGTTAATTTGCCAGAAAGTGTAAGAATGATGTGGGAGGAGGACTTGTCTGAGTTGCGCTGTGTGGATGAAGTTTCCCAGTGGTTTTCAGTTTTGGACAAATCTCCTTCTCAATCCATAGAGTTCAATCCCTCTGGTGGTGATCCACTCAAAAAAAGTCTCTGTGATGAACACCAAACATGTGCCCTCATGCATACTTCTTCATCTGAATGCATATCAGAGATGAATAGTACCACTAAGAAGCGTTTATTCTCAGAGTTAGGCATTGAAGAGCTTTTAAATGGAGGATCCAGCCTTGAAGATCAAATATCTACTACAAAAAGAAGGAGGACAGAATATTCACCTGCGAACACCAATCCTGTGTCCATTAATCATAGTCAGAAGACAGAGGAGTCCACAAAGGTTGCCCGGAAGAGGGCTCGGCCCGGGGAGGGTGCTCGGCCTCGGCCGAAAGACCGTCAGCAGATCCAAGACCGGATTAAAGAGTTGAGGGGGATCATCCCCAGTGGTGGAAAGCTCATTGACAAGGCAAACCGTATCGATGCAAAGGGCCAAACTTTGGGAAAATCAGATATGAAAGATGATAATGGTGTTACATGGGCTTTTGAAGTTGCAGGTCAAACACTGGTATGCCCCATTATAGTTGAGGACATGAACCCACCAGGCCAAATGCTGATAGAGATTCTCTGTGAGGAGAAGGGTTTGTTCCTTGAGATAGCAGAGATAATCCGAGGATATGGATTGAATATTCTGAAAGGAAAGATGGAAGTTAGAGACAACAAGTTATGGGGTCGCTTTATTGTTGAGCTAGCTATTGCTTCACTCTTTCACATTACACACATTCAAGCAGCTTCACCTGTTTCAGCTGCATCAAACTGGAAGTTGGAAGAAAAACCCGAGAATTGGACTTCATTCTTCTTGGAAGTTGCTCTTCCTTTCGAATTCGCCTTCTCTGTTTTCGATTTCCTTCGATTCCTTCTCATCGCAATCGATATGGGGGATGCAGCCGATAAATTGGCGCATTTCCAAGCGATCACAGGCCTACAAGATCCCGACTTATGCACAGAGATTCTTGCAGCCCATGGCTGGGACCTCGACCTCGCGATCTCCTACTTCACCTCCATCGACACCAATCCGCCACCGTCAGGTGCTTCCGCCGATGCTGGCTCTTCCGCTGTCGGTCACCACACGTCCAATGGCGATTCACTTCGTGCCTTGCAACCATCGGAGCCCGCTCCTCCTGGCTTGGCTTGGAAGCTCATTAAGTTGCCGGTTTCTATCATTTCTGGTAGTTTGAGCTTAATTTCTGGCGCGATTGGCTTCGGCTTTTGGGCCGCCGGCGGTGTGCTCTCCTATTCACTCGGCATGTTAGGGTTGGGCGCGGGTTCGTCTAGGAACGATCAGTCCACAGCGCGTTTGATTCCCGTGTCGGCAGCGGCAACTGAGGCTATGAATTTTGTGGCAGGGTTTGAGAGAGAATACGGTACCACTCGGCCTAATTTTGTGAGCGAGGGCTTTATGGACGCCCTGCAAAGGTCAAGGAATGCCTTTAAACTTCTATTTGTTTACTTGCACTCGCCAGAGCATCCGGATACGCCTTTATTCTGTGAGAGGACTCTGTGCTCGCCGACTTTTGTGGCGTTTGTGAATGACAATTTCGTGTCATGGGGAGGTAGTATTCGGACTAGTGAAGGGTTTAAGATGAGTAACAGCCTGAAGGCTTCTCGGTTTCCATTTTGTGCTGTAGTCATGGCCGCAACAAATCAGAGGATTGCACTGCTTCAACAGGTTGAAGGTCCAAAATCTCCTGAGGAGATGCTTGTGATGCTGCAGAGAGTGCTTGAAGAAAGTTCCTCAGTTCTAGTTGCAGCAAGGCTAGATGCAGAAGAAAGACAAAACAATATGCGCTTAAGGGAGGAGCAAGATGCTGCTTATAGAGCTGCACTAGAAGCCGATCAAGCTAGGGAACGGCAGAGGAGAGAAGAACAAGAACGTCGTGAAAGGGAAGCTGCTGAAGCTGAGAGGCGACGCAAGGAGGAAGAGGAGGCTCGAGAAAGGGCAGCACAAGAAGCTGCAGAGAAGCAGGCTGCATTAGCTAAAATGCGCAAGGAGAAAGCCCAGTCACTTGGTCAAGAACCTATGAAAGGACCTAATGTCACACGGGTTTTGGTTCGGTTTCCAAATGGTGAACGCAAGGAAAGGAGGTTCCACAGCACAGTGAAAATCCAGTCTTTATATGACTATGTCGACTCATTGGGCTGTTTAGAAGCTGAGAGTTACAGTCTAGTCTCCAATTTTCCTCGGGTTGTTTATGGACAAGAAAAGCTTATGCTATCATTGGAGGAAGCAGGATTGCATCCTCAGGCCAGCCTCTTTGTGGAGCTCAATTCATGA 3120 0.4712 MAGVTPCSGAFLLLIPCKSLSFLGLSDVTPSFSVLTMALVFQMPPGQVAFTGKPRWMLSDHCEHDSELLQQFSSGIKTIAVISVRPWGVVQFGSTHKIPESQDFMEQTQRLLMGTENVLDMVDASPWGLENYDPNGLLDSENLLSWTLNSDDDIDDNSKKPSMDNSFPWIHEEGIMGLHGESSCVIDQFTTDRAGSDVFLKPNSTWGGEVSSLASSGAQDVTPEDSALTSLHSMNTGGTFQSNVNLPESVRMMWEEDLSELRCVDEVSQWFSVLDKSPSQSIEFNPSGGDPLKKSLCDEHQTCALMHTSSSECISEMNSTTKKRLFSELGIEELLNGGSSLEDQISTTKRRRTEYSPANTNPVSINHSQKTEESTKVARKRARPGEGARPRPKDRQQIQDRIKELRGIIPSGGKLIDKANRIDAKGQTLGKSDMKDDNGVTWAFEVAGQTLVCPIIVEDMNPPGQMLIEILCEEKGLFLEIAEIIRGYGLNILKGKMEVRDNKLWGRFIVELAIASLFHITHIQAASPVSAASNWKLEEKPENWTSFFLEVALPFEFAFSVFDFLRFLLIAIDMGDAADKLAHFQAITGLQDPDLCTEILAAHGWDLDLAISYFTSIDTNPPPSGASADAGSSAVGHHTSNGDSLRALQPSEPAPPGLAWKLIKLPVSIISGSLSLISGAIGFGFWAAGGVLSYSLGMLGLGAGSSRNDQSTARLIPVSAAATEAMNFVAGFEREYGTTRPNFVSEGFMDALQRSRNAFKLLFVYLHSPEHPDTPLFCERTLCSPTFVAFVNDNFVSWGGSIRTSEGFKMSNSLKASRFPFCAVVMAATNQRIALLQQVEGPKSPEEMLVMLQRVLEESSSVLVAARLDAEERQNNMRLREEQDAAYRAALEADQARERQRREEQERREREAAEAERRRKEEEEARERAAQEAAEKQAALAKMRKEKAQSLGQEPMKGPNVTRVLVRFPNGERKERRFHSTVKIQSLYDYVDSLGCLEAESYSLVSNFPRVVYGQEKLMLSLEEAGLHPQASLFVELNS 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0791 1039 SUPERFAMILY Thioredoxin-like 722 867 IPR036249 -
Bisa11g0791 1039 Gene3D Glutaredoxin 717 865 - -
Bisa11g0791 1039 Pfam UBX domain 958 1036 IPR001012 GO:0005515
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 622 647 - -
Bisa11g0791 1039 CDD UAS 743 858 - -
Bisa11g0791 1039 SMART 45neu3 727 853 IPR006577 -
Bisa11g0791 1039 ProSiteProfiles UBX domain profile. 957 1035 IPR001012 GO:0005515
Bisa11g0791 1039 Gene3D - 958 1037 - -
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 372 398 - -
Bisa11g0791 1039 SMART ubx_3 955 1037 IPR001012 GO:0005515
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 893 951 - -
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 351 371 - -
Bisa11g0791 1039 CDD UBX 963 1036 - -
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 622 648 - -
Bisa11g0791 1039 Gene3D - 575 625 - -
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 342 398 - -
Bisa11g0791 1039 Coils Coil 888 946 - -
Bisa11g0791 1039 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 43 110 IPR025610 -
Bisa11g0791 1039 Pfam UBA-like domain 579 614 - -
Bisa11g0791 1039 PANTHER FAS-ASSOCIATED PROTEIN 583 1036 - -
Bisa11g0791 1039 CDD UBA_FAF 584 612 - -
Bisa11g0791 1039 MobiDBLite consensus disorder prediction 893 957 - -
Bisa11g0791 1039 SUPERFAMILY Ubiquitin-like 920 1036 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0791 Bisa-ChrBisa11 22913114 22926741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0791 379 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.333 1.13e-38 152