Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0752 ATGAGGAAGCAGAGCTCAGGCCACAGGGGGGATGAACTTCAAGGTCCACTCTGTCATGTGAACCCCATCAACATGGCATTTAACAAACTTCAACCTTCTTTCCTTTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTGCTTTCGTAAAGACGTGTTGTTTAATAGACCACGAGAAATGGATGGAGCAAGTTGTATAGACGAAAGCACCACAACGGACTCTATTTCTGTGTCGCTTTCTCCGATGGCGAATCCGTCCGAGAAGTTGTCGCCGCCGCCTCCGAACACTCTCTGCCGCGTCGGCAGCGGCGCCAGCACCGTGGTGGACTCCGACGGTGGCGTCGAGGCCGAGTCCAGGAAGCTACCGTCGTCCAAGTACAAAGGCGTCGTCCCTCAGCCCAATGGCCGTTGGGGAGCTCAGATTTACGAGAAGCACCAGCGAGTGTGGTTGGGGACCTTCAACGAAGAAGACGAAGCCGCCAGAGCCTACGACATCGCCGCGCAGAGGTTCCGCGGCAGAGACGCCGTCACCAATTTCAAGCCCCTCGCCACAGTCGACTCCGACGCCGACATCGAAACGGCCTTCCTAACTTCGCATTCGAAAGCCGAGATCGTCGATATGCTCAGGAAGCACACCTACAATGACGAGCTCGAACAGAGCAAGCGCAACTACGGATCGACGGACGGCTCCGGAAAACGGATCAACCAAGACGGATCCACGAAGTGCGGTTCGTTCGGGTCGAGTCGGGTCAACAGAGAGCGCGAGCAATTGTTCGAGAAGGCGGTTACGCCGAGCGATGTGGGGAAGCTGAACCGGCTTGTGATACCGAAGCAGCACGCGGAGAAGCACTTCCCGTTGCCGGTTACCGGGATCTCGACGGCGACGCCGTGCGCGGCGGCGTCGGCGGCGAAGGGAGTGCTGTTGAATTTCGAGGACGGAGGAGGGAAGGTGTGGAGGTTTCGTTACTCGTATTGGAACAGTAGTCAGAGCTACGTGCTGACGAAGGGGTGGAGCCGGTTCGTGAAGGAGAAGAAACTGAAAGCTGGAGACACGGTCTGTTTTCGCCGGTCGACCGGACAGGACAAGCAGCTTTACATTGACTGGAAGGCCAGGAGCATCAACACTACTGCTGCTGCAACGGAAGGGGTTGCCGGGTTGTTCGACCCGGTCGGACCGATTGTTGAGCCCGTTCCGATGGTGAGGCTGTTTGGGGTTAATATTTTGAAACTTCCCGGTTCAGATGCCACCGGTGGGTGTTTCAGTGGGAAGCGAAGAGAGATGGATCTGTTCACCTTAGAGTGTACCAAAAAACCAAAGATCATTGGAGCTTTGTAA 1332 0.5601 MRKQSSGHRGDELQGPLCHVNPINMAFNKLQPSFLSLYLSLSLSLCFRKDVLFNRPREMDGASCIDESTTTDSISVSLSPMANPSEKLSPPPPNTLCRVGSGASTVVDSDGGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAAQRFRGRDAVTNFKPLATVDSDADIETAFLTSHSKAEIVDMLRKHTYNDELEQSKRNYGSTDGSGKRINQDGSTKCGSFGSSRVNREREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPVTGISTATPCAAASAAKGVLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKKLKAGDTVCFRRSTGQDKQLYIDWKARSINTTAAATEGVAGLFDPVGPIVEPVPMVRLFGVNILKLPGSDATGGCFSGKRREMDLFTLECTKKPKIIGAL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0752 443 SUPERFAMILY DNA-binding pseudobarrel domain 255 366 IPR015300 -
Bisa11g0752 443 Pfam AP2 domain 123 171 IPR001471 GO:0003700|GO:0006355
Bisa11g0752 443 MobiDBLite consensus disorder prediction 222 246 - -
Bisa11g0752 443 SUPERFAMILY DNA-binding domain 123 179 IPR016177 GO:0003677
Bisa11g0752 443 Gene3D AP2/ERF domain 123 180 IPR036955 GO:0003700|GO:0006355
Bisa11g0752 443 Pfam B3 DNA binding domain 257 368 IPR003340 GO:0003677
Bisa11g0752 443 FunFam AP2 domain-containing protein RAP2.8 123 180 - -
Bisa11g0752 443 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 119 414 IPR044800 GO:0003700
Bisa11g0752 443 CDD AP2 123 178 IPR001471 GO:0003700|GO:0006355
Bisa11g0752 443 ProSiteProfiles B3 DNA-binding domain profile. 257 371 IPR003340 GO:0003677
Bisa11g0752 443 SMART B3_2 257 371 IPR003340 GO:0003677
Bisa11g0752 443 SMART rav1_2 124 185 IPR001471 GO:0003700|GO:0006355
Bisa11g0752 443 ProSiteProfiles AP2/ERF domain profile. 124 179 IPR001471 GO:0003700|GO:0006355
Bisa11g0752 443 CDD B3_DNA 256 356 IPR003340 GO:0003677
Bisa11g0752 443 Gene3D - 245 381 IPR015300 -
Bisa11g0752 443 MobiDBLite consensus disorder prediction 218 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0752 Bisa-ChrBisa11 22329903 22331581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0752 63 443 B3 DNA Binding Superfamily AT1G25560 61.381 2.73e-149 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Bisa11g0752 B3 2e-28 CL0405