Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0749 ATGCAAACTGATTTCTCCTACATATCCTCCTCCTTCCAACCACAACATCATCATCATCATCAACATCTACTCCTTCATGACGAAGACTCCATCTCCCTCTCTCTCGCCCCTCCTGGCCAACCCCACAACACCAACCATAACCCCAAACTCAACGACGTCGTATCTCCAACTCTTCGTCATCGTCAAAACCCTATTCCTCCCTCTGTTGATGGAGTCACCGTTGCCCTCCACATCGGCCTTCCTTCTTCCGCCACCCCCGACTACCCCTTGTTATTGCCTTCTTCTTCTTCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCCGCTTCTTCTTCTTCGTCATATGCCACTCACGTGCCGGGCCAGTACTGGATCCCTTCTCCAGCTCAGATCCTCATCGGCCCCACTCAGTTCTCTTGCTCCGTCTGCAACAAAACCTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCGCAGTACAGGAAAGGCCCAGAATCTCTGAGAGGGGCAAAGCCTGCGTCTTCAATTCTGAGACTCCCATGTTATTGCTGCGCCGAGGGTTGCAGGAACAACATCCACCATCCCAGGTCGAGGCCCCTCAAGGACTTCCGGACGCTTCAGACCCACTACAAGCGCAAGCACGGCGCCAAGCCCTTTGGTTGCCGGAAGTGCGGCAAGCCCTTCGCCGTCCGTGGAGACTGGCGGACCCACGAGAAGAACTGCGGAAAGCTCTGGTTCTGCATCTGCGGCTCCGATTTCAAGCACAAGAGGTCCCTCAAGGACCACGTCCGCGCCTTCGGCCACGGCCACTCCCCCCACACTGTGGAGACTGGATGCGATCAGCTCGGCCGTGGCCGGGATGAGGAGGACGAGGAGGAAGAGGATGAGGACGAGGAGGATGACGATGATGAGGACGATGAGGACGAGAAGAGTGAGGTGTTAGTTTATAATGGCAGTCATCGGTCGATTTACTTTTGA 990 0.5434 MQTDFSYISSSFQPQHHHHHQHLLLHDEDSISLSLAPPGQPHNTNHNPKLNDVVSPTLRHRQNPIPPSVDGVTVALHIGLPSSATPDYPLLLPSSSSSSSSSSSSSSSASSSSSYATHVPGQYWIPSPAQILIGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSILRLPCYCCAEGCRNNIHHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGHGHSPHTVETGCDQLGRGRDEEDEEEEDEDEEDDDDEDDEDEKSEVLVYNGSHRSIYF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0749 329 FunFam Zinc finger protein WIP2 192 274 - -
Bisa11g0749 329 Gene3D Classic Zinc Finger 198 278 - -
Bisa11g0749 329 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
Bisa11g0749 329 MobiDBLite consensus disorder prediction 32 69 - -
Bisa11g0749 329 SUPERFAMILY beta-beta-alpha zinc fingers 208 243 IPR036236 -
Bisa11g0749 329 MobiDBLite consensus disorder prediction 276 329 - -
Bisa11g0749 329 MobiDBLite consensus disorder prediction 91 112 - -
Bisa11g0749 329 PANTHER ZINC FINGER PROTEIN WIP2 13 303 IPR043584 GO:0003700|GO:0010468
Bisa11g0749 329 MobiDBLite consensus disorder prediction 290 315 - -
Bisa11g0749 329 SUPERFAMILY beta-beta-alpha zinc fingers 118 159 IPR036236 -
Bisa11g0749 329 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Bisa11g0749 329 SMART c2h2final6 249 272 IPR013087 -
Bisa11g0749 329 SMART c2h2final6 223 243 IPR013087 -
Bisa11g0749 329 SMART c2h2final6 138 160 IPR013087 -
Bisa11g0749 329 Gene3D Classic Zinc Finger 137 160 - -
Bisa11g0749 329 MobiDBLite consensus disorder prediction 36 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0749 Bisa-ChrBisa11 22217072 22218517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0749 17 279 C2H2 Transcription Factor Family AT1G13290 65.530 4.10e-119 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa11g0749 None None None