Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0748 ATGCAGCGGCAGAAGATGGCCTTCCGCCACTACATCGAAGCCCTAGAGCGAGAGCGAACGAAAATTCAGGTCTTCTCCAAAGAGCTCCCGCTTTCCCTGGAGCTTGTCACACAAGCCATTGAAGCGTGCAAACAACAGATGTCGGGGACGACGACGGAGTACAATTTTCAGGGGCAATCGGAGTGCTCGGAGCAGACGTCGATGGAGGAGGGTCCTGTGTTGGAGGAGTTTATCCCGATTAAGAAGAGGCCTTCCCCTGATTGTGACGACGACGACGACGACGACGACGAAGAAGAAGAAGACGAGCAACATTCGCATAAGCCTAAGATTCTGAAGGATAGTAATAATACTAAGAACTCTGATAAGAAGAAATCGGATTGGCTCAGATCTGTTCAGTTATGGAATCCAGATCCCCCACCTAAAGAGGATGTGCCTAGAAAGGCGTCGGTGGTGGAGGTGAAAAGCCATGGGGGAGCCTTCCAGCCATTCCACAGAGAGGGAAGTTTGGGAAAGGCTAACAATAAGGGCAACAACAACCACCACCACATTGCGTCGCCATCTCCGGCGCCGGTGGCTGCGACGAGCTCCAGCGCCGGAGCGGTCAGCGGAGGCAGCAAGAGGTCGGAGGAGAAGGAAGGGCAGGGACAGAGGAAGCAACGGCGGTGCTGGTCGCCGGAGTTGCACAAGCGCTTCTTGCAAGCTCTTCAACAGCTAGGAGGTGCAGATTCTGCAACGCCGAAGCAGATCAGAGACCTCATGAAGGTCGATGGCCTTACGAATGACGAAGTCAAGAGCCACTTACAGAAATTCCGATTGCACACAAGAAGACCCAGTCCCATGACTCCCAACAATGCTCCTCCACAGACAGCTCCTTTTGTGCTTGTGGGAAACATCTTTGTGCAGCCACCAGAGTACGCGGCAGCTGCAGTGGCAACCTCGACGGCCTCGGGGGAGGTTGGCACCCCGGGCGGGATTTACGCACCGGTGGCCAGCCACCCTGCGGGGCCGAGGAAGCCGCAGTTGAAGCAGCTGGAGCAGGGAGAGCATTGGGAAGAAGAGAGGGTGAACCAGAGTGAAGGGGCTGTTCATTCCAATTCCCCTGCTTCCTCATCCTCCACACACACCACCTCCTCCACCTCTCCTGCCTATTGA 1152 0.5556 MQRQKMAFRHYIEALERERTKIQVFSKELPLSLELVTQAIEACKQQMSGTTTEYNFQGQSECSEQTSMEEGPVLEEFIPIKKRPSPDCDDDDDDDDEEEEDEQHSHKPKILKDSNNTKNSDKKKSDWLRSVQLWNPDPPPKEDVPRKASVVEVKSHGGAFQPFHREGSLGKANNKGNNNHHHIASPSPAPVAATSSSAGAVSGGSKRSEEKEGQGQRKQRRCWSPELHKRFLQALQQLGGADSATPKQIRDLMKVDGLTNDEVKSHLQKFRLHTRRPSPMTPNNAPPQTAPFVLVGNIFVQPPEYAAAAVATSTASGEVGTPGGIYAPVASHPAGPRKPQLKQLEQGEHWEEERVNQSEGAVHSNSPASSSSTHTTSSTSPAY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0748 383 Pfam Myb-like DNA-binding domain 220 269 IPR001005 -
Bisa11g0748 383 Gene3D - 217 275 - -
Bisa11g0748 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 215 275 IPR017930 -
Bisa11g0748 383 MobiDBLite consensus disorder prediction 102 128 - -
Bisa11g0748 383 NCBIfam myb-like DNA-binding domain, SHAQKYF class 218 273 IPR006447 GO:0003677
Bisa11g0748 383 MobiDBLite consensus disorder prediction 171 203 - -
Bisa11g0748 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 354 IPR044787 GO:0003700|GO:0006355
Bisa11g0748 383 MobiDBLite consensus disorder prediction 76 225 - -
Bisa11g0748 383 MobiDBLite consensus disorder prediction 316 383 - -
Bisa11g0748 383 FunFam Myb family transcription factor 217 275 - -
Bisa11g0748 383 MobiDBLite consensus disorder prediction 359 383 - -
Bisa11g0748 383 SUPERFAMILY Homeodomain-like 216 276 IPR009057 -
Bisa11g0748 383 MobiDBLite consensus disorder prediction 342 358 - -
Bisa11g0748 383 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0748 Bisa-ChrBisa11 22158216 22160682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0748 11 330 G2-like Transcription Factor Family AT1G68670 49.713 2.61e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa11g0748 Myb_DNA-binding 7.8e-06 CL0123