Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0710 ATGCCCGAGCCTCGGAATCAACCTCTACATCAGACGAACAATCTCTGCAAGAAAATGAAGCATAAGCTAAATCCACGGCAAGAGGCGAGAAAGCTGCGAATAATCTGTGACGACCCTGACGCTACCGATTCATCTTCAAGCGAAGACGAAACAGAACGAATCGAAAGGCCAAGGCGGAGAAAGATGAAACGAATCGTTCGCGAGCTCACTCTTCCTCTTGCTTCAGCCATGTCTAGATTTGCCGAATCTGAGTCCTCATTTCAGGAAAGCAATAATGGAGCAAAGACTTGTAAATCCACGGAAGGTCAAACTCATGCTCAGGCTCAGAACTCGAACAAGAAGAGGGTTTTGACCAAAACCTTATCGACGAGAAGCTCGTCGTCTTCGAGATTCAGAGGCGTTCGACAGAGAAAATGGGGGAAATGGGCTGCTGAAATTCGTGACCCATTTAAAGGTGTTCGTATATGGTTGGGTACTTACAACACTGCACAGGAAGCTTCACAAGCTTACGAAGCGAAGAGAATGGAATTCGAAGCCATGGCCAAGGCTCTATCTCAGAAGACTCCTAATGTGTCTTCTTCAGGTCAAGCACCTGCAATTTCTGACGATGCAGAGAGTGTCTTCTCTCAAACCTCGCCTTCCTCTGTGCTTGAACTCGACACCTCAACATCGAAATCCACAGAAGATACTGTTGCTACTAATGTCAATAAAAGTTCGAGCAAAGAGGAAGGAGAAGGAGCAGCAGCTGATCTTGAGACCAATGACTTCGAGAACGAATTGGCAGAGCTTCAAATCCCGGATTTGAGCTTCAAAAACGAATTTGCAGAGCTTCAAATCCCGGATTTGAGCTTCCTGAACGAGCCACCACAGGCGCCGCCGCCGCCACCACCCGCGCTGGGTTCAGACACAAACCTTGGAGTCGACCTGGATTGGATCATGTTGGATGATTTAGCTCAGGGATTCAAGGACCCCTTCGGCCTAGAGGACATTCAGATTTGTGGGTTTGATGACAACGACGACCCCAGTGAGCTTCCTGATTTCGATTTCGATCTGTGTGCTGACGAGTTTGCTGGTTGGAATGAGGAGCCCCTCAATATACCTTGCGTATAA 1110 0.4802 MPEPRNQPLHQTNNLCKKMKHKLNPRQEARKLRIICDDPDATDSSSSEDETERIERPRRRKMKRIVRELTLPLASAMSRFAESESSFQESNNGAKTCKSTEGQTHAQAQNSNKKRVLTKTLSTRSSSSSRFRGVRQRKWGKWAAEIRDPFKGVRIWLGTYNTAQEASQAYEAKRMEFEAMAKALSQKTPNVSSSGQAPAISDDAESVFSQTSPSSVLELDTSTSKSTEDTVATNVNKSSSKEEGEGAAADLETNDFENELAELQIPDLSFKNEFAELQIPDLSFLNEPPQAPPPPPPALGSDTNLGVDLDWIMLDDLAQGFKDPFGLEDIQICGFDDNDDPSELPDFDFDLCADEFAGWNEEPLNIPCV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0710 369 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Bisa11g0710 369 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 241 - -
Bisa11g0710 369 SMART rav1_2 130 194 IPR001471 GO:0003700|GO:0006355
Bisa11g0710 369 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Bisa11g0710 369 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Bisa11g0710 369 MobiDBLite consensus disorder prediction 188 241 - -
Bisa11g0710 369 CDD AP2 133 172 IPR001471 GO:0003700|GO:0006355
Bisa11g0710 369 SUPERFAMILY DNA-binding domain 129 177 IPR016177 GO:0003677
Bisa11g0710 369 Pfam AP2 domain 129 179 IPR001471 GO:0003700|GO:0006355
Bisa11g0710 369 Gene3D AP2/ERF domain 129 184 IPR036955 GO:0003700|GO:0006355
Bisa11g0710 369 MobiDBLite consensus disorder prediction 1 62 - -
Bisa11g0710 369 MobiDBLite consensus disorder prediction 188 249 - -
Bisa11g0710 369 MobiDBLite consensus disorder prediction 80 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0710 Bisa-ChrBisa11 21345786 21346895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0710 27 368 AP2-EREBP Transcription Factor Family AT1G68550 35.530 1.18e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa11g0710 AP2 9.6e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0710 11 21345786 21346895 Bisa11g0710 11 21345786 21346895 ECH