Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0674 ATGAGCAAAATGGAGAATAATTCCTCATCCAATATTCAAGAACTCATCACCTCCAATCACAAATTGATCTTGAATCAACAGCTTAGTCTCTCTTCTATGCACACCAGTGATCCTATTCCACTGATTCAGTCACCATCATCCTCTGCTGATGATCATGAACAACCACGAACATTGCCTATATCAGAAAGATTTTTGGATTCTCCTCCTCCTATTTCTGCAACTCCTTTAGCTCAAAAGAACAAGAGCCTGGTTAGAAACAAGAGGAAGAGAAATAACAACAGATTGGAAGCCGAAGAGAAACCAAAAGAAGTCAATCATGTAAGGGCAAAAAGAGGCCAAGCAACTGACAGCCACAGTTTAGCAGAAAGGGTGAGAAGAAAGAGAATAAATGAGAAGCTGAGATGTTTACAGGATTTGGTTCCAGGGTGTTCCCAGGCTATGGGAATGACAGTGATGTTAGATGTAATAATAGATTATGTTCAAACACTACAGCATCAGATTGAGTTTCTTTCCATGAAGCTCACAGCAGCAAGTTTGCATCTTGAAAGCTTTCAGAGGAATCTAGATTCTTGTGAAGTCCAAGAGATGGAGAATATTGGAGAAGAAGGTTTTGGAGGGTACTCTTATTTCAGTCCAACGTGGCCACTTCATTAA 654 0.4006 MSKMENNSSSNIQELITSNHKLILNQQLSLSSMHTSDPIPLIQSPSSSADDHEQPRTLPISERFLDSPPPISATPLAQKNKSLVRNKRKRNNNRLEAEEKPKEVNHVRAKRGQATDSHSLAERVRRKRINEKLRCLQDLVPGCSQAMGMTVMLDVIIDYVQTLQHQIEFLSMKLTAASLHLESFQRNLDSCEVQEMENIGEEGFGGYSYFSPTWPLH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0674 217 Gene3D - 109 189 IPR036638 GO:0046983
Bisa11g0674 217 Pfam Helix-loop-helix DNA-binding domain 117 145 IPR011598 GO:0046983
Bisa11g0674 217 SMART finulus 119 169 IPR011598 GO:0046983
Bisa11g0674 217 MobiDBLite consensus disorder prediction 35 120 - -
Bisa11g0674 217 MobiDBLite consensus disorder prediction 89 120 - -
Bisa11g0674 217 MobiDBLite consensus disorder prediction 35 54 - -
Bisa11g0674 217 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 70 183 IPR024097 GO:0006355
Bisa11g0674 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 113 163 IPR011598 GO:0046983
Bisa11g0674 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 179 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0674 Bisa-ChrBisa11 19073205 19074991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0674 99 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 59.375 9.23e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa11g0674 HLH 3e-05 No_clan