Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0673 ATGTCTGCAGTTTCAGAGAGAGAGTTAAAGTCTAGTGAAGAAGAAACTGATCTGAGAAGAGGCCCTTGGACTCTCGAAGAAGACAGCTTGCTCATTCACCATATTGCTCGCCATGGTGAAGGCCGCTGGAATATATTAGCCAAAACTGCAGGATTGAAGAGGACTGGGAAGAGTTGCAGATTAAGATGGCTGAACTACCTGAAGCCAGACATCAAGAGAGGAAACCTCACCCCACAAGAGCAGCTCTTGATCCTTGAACTCCATTCCAAGTGGGGTAACAGGTGGTCGAAAATTGCGCAGCATTTGCCGGGAAGAACAGACAATGAGATCAAGAACTACTGGAGAACAAGGGTTCAGAAGCAGGCACGCCAGCTCAACGTCGAGTCTGGAAGTGAGAGATTCATCGATGCCGTGCGAAGTTTCTGGATGCCGAGGTTGCTTCAGAAGATGGAACAGAATTCTTCGTCTTCTTCCTCTTCTATCACAGACATGAGCTCTGAGAATTCTGCTGTTAATGTTGTCCCTTCTCTGTCTCCTCCTCATAGGGAATTCGCAGAATTTGCAGCAAATCAGACAAGTACCAGCAGCAACAATAATAACAATCATAATTCCCCAGATTACCATTCCTTGCAATTTCAAAAACCAACTGAGATATCAGAGAACCCAACAAGTACTCTTTCTTATGTGTTCGAGAATTACAGTAATAACAACAGTAGTAATGTCTGCTTCAATTCAGTTCAAGATAGCCACGGCATGGAAGGCCTAAACTTGGAACCTTTTACAGCACTGGAAAATTATGGGGTTTCTCAGTTTGATTATTCAGAGAATAATTGGGTTCTAAGCAGCATGGGAGATTCTCTGTGGAATCTGGATATCTGA 879 0.4403 MSAVSERELKSSEEETDLRRGPWTLEEDSLLIHHIARHGEGRWNILAKTAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNVESGSERFIDAVRSFWMPRLLQKMEQNSSSSSSSITDMSSENSAVNVVPSLSPPHREFAEFAANQTSTSSNNNNNHNSPDYHSLQFQKPTEISENPTSTLSYVFENYSNNNSSNVCFNSVQDSHGMEGLNLEPFTALENYGVSQFDYSENNWVLSSMGDSLWNLDI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0673 292 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Bisa11g0673 292 SMART sant 19 69 IPR001005 -
Bisa11g0673 292 SMART sant 72 120 IPR001005 -
Bisa11g0673 292 FunFam Myb transcription factor 20 72 - -
Bisa11g0673 292 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 211 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa11g0673 292 MobiDBLite consensus disorder prediction 152 175 - -
Bisa11g0673 292 CDD SANT 77 116 IPR001005 -
Bisa11g0673 292 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 35 44 IPR001345 GO:0003824
Bisa11g0673 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Bisa11g0673 292 CDD SANT 22 67 IPR001005 -
Bisa11g0673 292 Gene3D - 20 72 - -
Bisa11g0673 292 FunFam MYB transcription factor 77 140 - -
Bisa11g0673 292 Gene3D - 76 118 - -
Bisa11g0673 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 67 IPR017930 -
Bisa11g0673 292 SUPERFAMILY Homeodomain-like 17 114 IPR009057 -
Bisa11g0673 292 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Bisa11g0673 292 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Bisa11g0673 292 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0673 Bisa-ChrBisa11 18999367 19000479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0673 15 159 MYB Transcription Factor Family AT1G68320 81.379 7.08e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g0673 Myb_DNA-binding 1.7e-14 CL0123