Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0664 ATGGGTTCCAAAACGGAAGGACCGTCTGCCCCAGCAATTCGACGAGACCCATATGAGGTGTTGTCTGTGTCAAGGGACGCAAGTGATCAGGAGATAAAAACCGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAATGCTAACAATCCTGAAGCCTCAGAACTATTTAAAGAGGTTGCATTTTCGTACACTATCTTGTCTGACCCAGAGAAGAGAAGGCAATATGATAGTGCAGGATTTGAGGCACTTGAAGCTGACAGCATGAACATGGAAGTTGACTTATCCAATCTTGGAACTGTCAATACAATGTTTGCAGCCTTATTCAGCAAGCTGGGTGTCCCTATCAAGACCACTATTTCAGCTAATGTTCTTGAAGAAGCTCTGAGTGGCACAGTGACAGTCAGACCCCTTCCAATTGGAACATCAGTAAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGGAGCAAGCTGCATCAGGAGTTGTCGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTGGCTATGGTTTGGCGCTGCAGGAAGAGAGTGAGAAGACTGGCAGGGTGACGTCTGCCGGAATGTATTTCTTGCATTTTCAAGTGTACAGATTGGATTCTACTATGAATGCTTTAGCAATGGCTAAGGATCCTGAAGCTGCCTTCTTTAAAAGGTTGGAAGGTCTGCAACCTTGCGAAGTCGCAGAACTAAAGCCTGGCACTCATATATTTGCCATCTATGGAGATAACTTCTTTAAGACTGCTTCCTATACGATTGAGGCGCTTTGTGCAAAATCATACGAGGATACCACCCAAAAACTTAAGGAAACTGAGGCCCAAATTTTAGCAAAAAGAAACGAGCTACGCCAATTTGAAATAGAATATAGAAAGGCCTTGGCACGCTATCAAGAAGTAACTGAAAGATACACTCGAGAAAAACAGGCAGTAGACGAGCTTCTGAAACAAAGAGATGTCATCCATTCTTCCTTCACTGTTTCCAAGCCAATCGTTATTAGTGGCAATGGTAGTAATTTGAGTAATGGAAGTAGTAGCAGCAAATATTTTAGTGAAGGTTCCAAAACAGAGAGCCTTGGAGAAGATGGAGGCTCAGATGGCAGGGATAAATCAGGCAGAAAGAAATGGTTTAATCTCAATCTTAATGGTTCTGGTAAGAGAATGTTTTGA 1242 0.4251 MGSKTEGPSAPAIRRDPYEVLSVSRDASDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAFSYTILSDPEKRRQYDSAGFEALEADSMNMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALSGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEEQAASGVVVRVTSTAQSKFKLLYFEHDANGGYGLALQEESEKTGRVTSAGMYFLHFQVYRLDSTMNALAMAKDPEAAFFKRLEGLQPCEVAELKPGTHIFAIYGDNFFKTASYTIEALCAKSYEDTTQKLKETEAQILAKRNELRQFEIEYRKALARYQEVTERYTREKQAVDELLKQRDVIHSSFTVSKPIVISGNGSNLSNGSSSSKYFSEGSKTESLGEDGGSDGRDKSGRKKWFNLNLNGSGKRMF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0664 413 CDD DnaJ 16 70 IPR001623 -
Bisa11g0664 413 MobiDBLite consensus disorder prediction 365 413 - -
Bisa11g0664 413 MobiDBLite consensus disorder prediction 383 399 - -
Bisa11g0664 413 PRINTS DnaJ domain signature 18 36 IPR001623 -
Bisa11g0664 413 PRINTS DnaJ domain signature 53 73 IPR001623 -
Bisa11g0664 413 PRINTS DnaJ domain signature 73 92 IPR001623 -
Bisa11g0664 413 PRINTS DnaJ domain signature 36 51 IPR001623 -
Bisa11g0664 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 410 - -
Bisa11g0664 413 Pfam DnaJ domain 16 78 IPR001623 -
Bisa11g0664 413 SUPERFAMILY Chaperone J-domain 15 88 IPR036869 -
Bisa11g0664 413 SMART dnaj_3 15 73 IPR001623 -
Bisa11g0664 413 Coils Coil 286 341 - -
Bisa11g0664 413 FunFam Chaperone protein dnaJ 16 2 98 - -
Bisa11g0664 413 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Bisa11g0664 413 Gene3D DnaJ domain 4 100 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0664 Bisa-ChrBisa11 18740379 18757457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0664 9 88 C2H2 Transcription Factor Family AT1G74250 41.176 6.87e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0664 11 18740379 18757457 Bisa11g0664 11 18740379 18757457 ECH