Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0654 ATGCTGTCCTATTTTCTATTAGGTAATCCGATTCGTTTTCGCACCAAGTGTCGCAGTCAGATCGGCATCTTGTTTTGTGGGGCACGCAGGCAGACATTCTCGCGGGTTGAGTTGGGTAAAGTTGATTTGAACTGTGAAGCCAAGAAAGGTACTGCTGGTGGTTTAGCTATGGCATCTGGTGGAAGGAGGCGTCACCATCATGATCTTGTGCCTCTTGCTGCATTGACAAGCAGAGACATGAAGAATGAGAAGATGGGGAAACCCACTGTGAGTTATGGGCATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAATAAAGACTGACTGTCACCGAGTACCTGGAAACTCTTCATCAGCATTTTCTGTATTTGCGATCTTTGATGGACACAATGGAAATGCTGCAGCCATTTTCAGTAGAGAGAACTTGTTAGATCACATTTTGGGTGCACTTCCTCTGGTAATCGGAAGAGAGGAGTGGCTTCAAGCATTACCTCGGGCACTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTTCAGTGCAGAGGAGAAACTTCTGGAACTACAGCGACGTTTGTGCTAGTTGATAGATGGACTGTGACAGTTGCATCAGTTGGAGATTCCCGTTGCATACTAGACACCCAGGGTGGTCCTCTTACCACCTTAACTGTTGATCACAGACTTGAAGAGAATACTGAAGAGAGAGAACGTGTAACTGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTTTTGGTGGTGCTGAGATTGGTCCCCTTCGTTGTTGGCCAGGGGGCCTATGCCTTTCTCGGTCAATAGGAGACATGAATGTTGGGGAGTTTATAGTTCCAATTCCTCATGTTAAACAAGTGAAGCTATTAAATGCTGGTGGGAGGTTAATAATTGCTTCGGATGGCATCTGGGATGCTCTATCCTCTGAAATGGCTGCAAAATCTTGTAGGGGTCTGCCTGCCGAACTTGCTGCTAGGCAGGTTGTGAAGGAAGCATTGAGGACAAGAGGTTTAAAGGATGATACAACTTGCATAGTAGTTGACGTAATTCCACCTGATAATGTATTGCCACCACCTCCCCCCAAAAAGCAGAACAAGTTGAGAGCTCTACTATTCAGGAAAAGGTCCCATGATTCTGCTCGTAAGCTGTCAACAAAGCTTTCAGCTGTTAATATAGTAGTGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGACTAGGGAATGATGACAATTCAGCACAATCAACATCTGGGCTATTTGTTTGCGCTGTGTGCCAAGTTGATCTTGCTCCAAATGAAGGCATTTCTGTTCATGCTGGCTCCATTTTCTCCACAACCTCCAAGCCCTGGCAAGGCCCTTTTCTTTGTGCTGATTGTCGCAACAAGAAGGACGCCATGGAAGGCAAACGACCCAGTAAAATTAAAGTATCCTAG 1452 0.458 MLSYFLLGNPIRFRTKCRSQIGILFCGARRQTFSRVELGKVDLNCEAKKGTAGGLAMASGGRRRHHHDLVPLAALTSRDMKNEKMGKPTVSYGHAAQSKKGEDYFLIKTDCHRVPGNSSSAFSVFAIFDGHNGNAAAIFSRENLLDHILGALPLVIGREEWLQALPRALVAGFVKTDKEFQCRGETSGTTATFVLVDRWTVTVASVGDSRCILDTQGGPLTTLTVDHRLEENTEERERVTASGGEVGRLSIFGGAEIGPLRCWPGGLCLSRSIGDMNVGEFIVPIPHVKQVKLLNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDVIPPDNVLPPPPPKKQNKLRALLFRKRSHDSARKLSTKLSAVNIVVELFEEGSAMLAERLGNDDNSAQSTSGLFVCAVCQVDLAPNEGISVHAGSIFSTTSKPWQGPFLCADCRNKKDAMEGKRPSKIKVS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0654 483 SMART PP2C_SIG_2 86 353 IPR001932 -
Bisa11g0654 483 CDD PP2Cc 92 353 IPR001932 -
Bisa11g0654 483 Pfam Protein phosphatase 2C 117 338 IPR001932 -
Bisa11g0654 483 PANTHER PROTEIN PHOSPHATASE 85 352 IPR015655 GO:0004722|GO:0006470
Bisa11g0654 483 ProSiteProfiles PPM-type phosphatase domain profile. 84 353 IPR001932 -
Bisa11g0654 483 SMART PP2C_4 83 351 IPR001932 -
Bisa11g0654 483 SUPERFAMILY PP2C-like 94 353 IPR036457 -
Bisa11g0654 483 Gene3D - 89 357 IPR036457 -
Bisa11g0654 483 FunFam probable protein phosphatase 2C 5 91 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0654 Bisa-ChrBisa11 18232436 18237140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0654 55 482 PP2C-type Phosphatase Gene Family AT1G68410 76.147 0.0 668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0654 11 18232436 18237140 Bisa11g0654 11 18232436 18237140 ECH