Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0630 ATGGTTGTCGGCTTATCCACCTTCTTCGTCTCCAGCGAGGCTGACACCACAGGAGGAGGAGGCTTTTTTATTTTCAATATGATTTCAAGAATCTTTGGCACTGCTCCACATGATGCTATTGATTCCCTCTCTAATTTCCTCATCGAGAATCGATATCAAAATCTTTTCAGCAGTCATCATCAACGAATTCCAGAGTACTCACTTCTTTCTAGGGCTTCGAGGTTTTTGTGTGGAGAATTCTTGGATTCAAAGATAATTGAAGAAGGAGAAGAAGATGTATGCAATGTTCAAGTTGATGTAGATGGAGATTTGATGAATTCAAAATTGAACCCTTTGGAAATGGAAGAAGATAAGAGAGTGTCAGTTAAGGATTATGTTCCCAGCTTTGCAGGAGGCAGTCACATTTTGGTGGTTCATGACGAGAGATTGTCCCTTGGCTACCTATCATCACTGCTTCGCCAATGCTCATTCAAAGTGACTGCTACTAATCAAGCATCAGGAGCTATGAACATGATTAGCCAGGAAGAAGGGAAATTCAAACTTGTGATGGCTAAAGCCAACATGCCTGACATGAGCACTCTTTCCTTCCTCAACAAGCTACTTCGGAAGGATATACCTGTCATCTTTATGTCCTCTGGACAAAACGATGGTGTAGCAAAGGCAGCAGTAGACAAAGGATTGTGTTACTTCCTTAAGGAACCAATCAAAGCAGAGGATTTCATACATGTTTGGCAAAAGGTGTATGACCCAGATCACAACTTAGCAAAAAGGATAAGAAATCCAAAATCCAAAGAGATGGTATGTTGTGGAAAGGAGGCACAGCATATTGAGACCAATGATGTAAGTCGCAAGGAGCAAGAAGCAAGCAAAGACCAAAACACAAGTGATGATGATGTCAAAGGGAAGAAGAGAACAGGGAAGAGAGATAAGGGCAGGTCACACCAGATGAACATAGAGAGCAATGCTGGTACTGAAGAGGAGGAGACGAAGGAAACGAGAGAACATAAGGACGACCAGTCCGGTCAGAAGAAGCCGCGTATGTGTTGGACTCCTGAACTGCATCAGAAGTTTGTGGAAGCCATAAGTGTTCTGGGAGATAAGTGTAATGTTACTTTTTCTGAATTCATTTCCTTCTGGTTCCATTCAGTTTGTAAGAAATTCAAATCTCAAATAAGGCGTCTTCAAGCGATTTGCAATAATGGTCTAACTCCGGCGAGTAAATCATCAAACTTGAGCAGTGGAACCAAGTCGTCCTCGTCATTTGAGAGCCAGAGTTACCCAGAAAGTGCAGGTTTCGAAAGTGCTGAGTTTGCTCCAGTTTTGCCCACATCAGCTGCTTTCCAGAATGAGAATCAGGATCAAGACCAGCTTCAAATGAACTTCACTGAAACTCAAGGACCAGAGATCCTCCAGCTGCAGCAAACCCCGGGCTATGCACAATCTTCATTTCAACATCCAACACAACTCACCAATTATGGAAATGAAGATCTAGAAACTATAGTTAAAGGCGCTGCACCAAACGCTTTAATGGATGAAAGCAAATATCAGGCAGAAAGTTATAATATCTCAAAATTTATAGGGGAAGATTTTGACAAATTTGACTGCTTTAGAAATGGATCAATTCTAGATGACACTGCACACCCTGGCTGTGTAAGTCCTTTGACGGCAAAGCCATCAGCTGCAATGGGAGGACCAGAGCCAGATGCTTTAATGATTCAAAGCCAAACCCCGGCAGAAGATTATGATTTATTAAGAATTCTTGGAGAAGATTTTGAAAGATATGACTCTTTTGGAAAAGGACTGGATGATAATACCCAAGACTCTGAGATACTTAAGAATTCAATCTATGGAAACAGCTCTAGTGCACAACAGCCTGATAACTGCAACATTAGCCATGCAAGTCTTTTGAAGGCTCAACCATCCGCCACAGTGGGAGGACCTGAGTCAGGTGCTTTAACTGACAGAAGCCAAACCCTGTCAGATTTTAATAGTATCTTGAGATTTCTTGGAGGAGATTGGGAAAGATATGACGGTTTTGGAATGGGATCATATAAAATTGACCAAAACTCTGAGATATCTAGGAACTCTATCCTTGGAAACAGTTTCACTCTACAGCAGTTTGATAACTGCCAGCCTAGCAGTGTAGGACTTCTGAAAGCTAAGCCGTGTGCTGTAGTGGGACAAACTATGCCAGATGCTTTAATGGATCACGACCAAACTCTGGCAGAGCATAACAGTATCTTAAGAATTCTTGGAGAAGATTCTGGTCAATATGAATGTTCTGGAAATGAACCAAGTCCAAATAATAGTGTGCAGTTGAGGAATTCTACATTTGGTGACAATTTCAATCCACCACAATCTGGGTCTGACTGGAGCTTCATATCAGAATTCAGAAGTATAGCTACAGTATATGGTCACCTTGTAGCAAGTCAATTTATAGCCACTCAACAATTGCTAGAGAGAAGTTGCAGGAACTTCCAACATGCATGGAAAAATAGGACAGTGTCACTGTTCAATTATGTCCCTAGCTTTGCACGAGGCAGCAACATTATGCTGGTACATAATGACATACACTCTCTTCGCCACCTATCCTCACTGCTTCGGCAATCCTCATTCATAGTTACTGCTACTAATCAAGCATCAGCAGCTATGGACATGATTTGCCAACAAGAAGGCAGGTTCAAACTTGTCATGGCTAAAGCTGATATGCCAGACACGATCACCTTTTCTTTCCTCAACAAGCTGCTTGTAAAGCAAATTCCTGTCATCTTCCTTTACTCTGGACAGAGTGACAGTGTAGCAAGGGCAGCATTACACAAAGGATTATGTTATTTATTCGAGGAGCCAATCCAACCGGAGGATCTCAAATGTGTGTGGCAACAAGTGCATGAAGCAAGTGAAAATCAAAATGGAAACCAAAATGTCAAAGGGAAAAGAGCAAAACTTAGCTCACACCAGACGAAATCGGACAGCAATCATCATACTGCTGAGGAGGAAGGAGAGGAGACAAGAGAACGTAATAATGATGGATCCACTGAGAAAAAGCCACGCATTTCTTGGACTCCTGATCTGCATCAAAAGTTTGTGAAAGCCATAAGTGAACTGGGGAACAAGAATATTCGTCCAAAAGACGTTCATCAGCTAATGAATGTTTCTAACCTGACACGCCGTCATGTTGCTAGCCATCTGCAGAGATTCAAGACTCAAGTAAGGCATCTTCAGGAGACGTGCATTACTGAATTGCCTCCGGCAAGTATATCATCAAACTTCAGTGATCAAACCAAGTCATCTTCGTCATTTGAGAGCCAGACTTGCCCAGGTTACCCCACATTGGCTGCTTTGCAGAGTAAGGACCAGAATCACAACCAGTCTCTGATGACCTTTGCCAAAACTCGAGGCCCAGAGATTTTCAAACTGCAGGAAACCCCAGGCTATGCAAACCTTACATTTCAATCTCCATCAACATTGGTCAATTACAGAAAGCAATATCTAGATGCTGCAGTGAGAGGACCTATGCCAGATGCTTCAATGGATAAAAACCAATATGTGGGAGAATACAATAAGATGTCAAAATTTCAGAGAGAAGATAGTGACAAATACAACTGCTTTGAGAATGGATCAAGTCCAGATGATACTTCCCCAAACTCTGAGATGCTAAAGAATTATATCTTTGCAAACAGTTCCAGTTCACAACAGTTTGATAACAGCAACCCAAGCTTCTTAAGTCTCTTGAAGGAAAAGCCATCAGCTGTAGTGGGAGGATTTGAGCCAGAAGCTTTGATGGATCAAAACGAAACACTGACAGAGCATAATAATATCTTGAGAATTTTTGGAGCAAACTGCAAAGAATATGACTGTTCTGGAAACGAACCTAGTAAAGATGATATCGCTGTACAGTGGAATTCTATATTTGGCAACAGTTCCAGTGCAGAGCAATCTGATAACTGCAATACTAGCTGTGTAAGATTTTTGAAAGCCAAGCCATGTGCATTTGATCTTATAGTTCTGTGA 4011 0.4171 MVVGLSTFFVSSEADTTGGGGFFIFNMISRIFGTAPHDAIDSLSNFLIENRYQNLFSSHHQRIPEYSLLSRASRFLCGEFLDSKIIEEGEEDVCNVQVDVDGDLMNSKLNPLEMEEDKRVSVKDYVPSFAGGSHILVVHDERLSLGYLSSLLRQCSFKVTATNQASGAMNMISQEEGKFKLVMAKANMPDMSTLSFLNKLLRKDIPVIFMSSGQNDGVAKAAVDKGLCYFLKEPIKAEDFIHVWQKVYDPDHNLAKRIRNPKSKEMVCCGKEAQHIETNDVSRKEQEASKDQNTSDDDVKGKKRTGKRDKGRSHQMNIESNAGTEEEETKETREHKDDQSGQKKPRMCWTPELHQKFVEAISVLGDKCNVTFSEFISFWFHSVCKKFKSQIRRLQAICNNGLTPASKSSNLSSGTKSSSSFESQSYPESAGFESAEFAPVLPTSAAFQNENQDQDQLQMNFTETQGPEILQLQQTPGYAQSSFQHPTQLTNYGNEDLETIVKGAAPNALMDESKYQAESYNISKFIGEDFDKFDCFRNGSILDDTAHPGCVSPLTAKPSAAMGGPEPDALMIQSQTPAEDYDLLRILGEDFERYDSFGKGLDDNTQDSEILKNSIYGNSSSAQQPDNCNISHASLLKAQPSATVGGPESGALTDRSQTLSDFNSILRFLGGDWERYDGFGMGSYKIDQNSEISRNSILGNSFTLQQFDNCQPSSVGLLKAKPCAVVGQTMPDALMDHDQTLAEHNSILRILGEDSGQYECSGNEPSPNNSVQLRNSTFGDNFNPPQSGSDWSFISEFRSIATVYGHLVASQFIATQQLLERSCRNFQHAWKNRTVSLFNYVPSFARGSNIMLVHNDIHSLRHLSSLLRQSSFIVTATNQASAAMDMICQQEGRFKLVMAKADMPDTITFSFLNKLLVKQIPVIFLYSGQSDSVARAALHKGLCYLFEEPIQPEDLKCVWQQVHEASENQNGNQNVKGKRAKLSSHQTKSDSNHHTAEEEGEETRERNNDGSTEKKPRISWTPDLHQKFVKAISELGNKNIRPKDVHQLMNVSNLTRRHVASHLQRFKTQVRHLQETCITELPPASISSNFSDQTKSSSSFESQTCPGYPTLAALQSKDQNHNQSLMTFAKTRGPEIFKLQETPGYANLTFQSPSTLVNYRKQYLDAAVRGPMPDASMDKNQYVGEYNKMSKFQREDSDKYNCFENGSSPDDTSPNSEMLKNYIFANSSSSQQFDNSNPSFLSLLKEKPSAVVGGFEPEALMDQNETLTEHNNILRIFGANCKEYDCSGNEPSKDDIAVQWNSIFGNSSSAEQSDNCNTSCVRFLKAKPCAFDLIVL 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0630 1336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1012 1071 IPR017930 -
Bisa11g0630 1336 SUPERFAMILY CheY-like 847 972 IPR011006 -
Bisa11g0630 1336 PANTHER TWO-COMPONENT RESPONSE REGULATOR 134 432 IPR045279 GO:0009736
Bisa11g0630 1336 MobiDBLite consensus disorder prediction 968 1020 - -
Bisa11g0630 1336 MobiDBLite consensus disorder prediction 277 347 - -
Bisa11g0630 1336 Pfam Myb-like DNA-binding domain 1019 1065 IPR001005 -
Bisa11g0630 1336 SUPERFAMILY CheY-like 132 250 IPR011006 -
Bisa11g0630 1336 MobiDBLite consensus disorder prediction 403 426 - -
Bisa11g0630 1336 MobiDBLite consensus disorder prediction 983 1020 - -
Bisa11g0630 1336 Pfam Response regulator receiver domain 135 242 IPR001789 GO:0000160
Bisa11g0630 1336 ProSiteProfiles Response regulatory domain profile. 849 963 IPR001789 GO:0000160
Bisa11g0630 1336 SUPERFAMILY Homeodomain-like 1013 1071 IPR009057 -
Bisa11g0630 1336 ProSiteProfiles Response regulatory domain profile. 134 248 IPR001789 GO:0000160
Bisa11g0630 1336 SMART REC_2 133 244 IPR001789 GO:0000160
Bisa11g0630 1336 Gene3D - 1011 1073 - -
Bisa11g0630 1336 Gene3D - 341 402 - -
Bisa11g0630 1336 MobiDBLite consensus disorder prediction 277 304 - -
Bisa11g0630 1336 MobiDBLite consensus disorder prediction 311 343 - -
Bisa11g0630 1336 Gene3D - 848 986 - -
Bisa11g0630 1336 Gene3D - 133 264 - -
Bisa11g0630 1336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 1015 1068 IPR006447 GO:0003677
Bisa11g0630 1336 FunFam Two-component response regulator 1011 1074 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0630 Bisa-ChrBisa11 17500063 17520950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0630 114 247 Response Regulator Gene Family AT4G31920 32.593 1.15e-18 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa11g0630 Response_reg 2.4e-10 CL0304