Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0625 ATGGGGTTGCAGAACCAGTTAAACGATGTTGCTTCAGATTCGATTCCGCTTCTTCTTCTGACTCTCGTCGCCAACTGCGTCAGCCACATCCGCTCCTTGCTTCTTGGCTTCCTCCAATCGCTCGGCCTATCCAGATTCGATCCGAACCCGGTCGTCGTCGATGACGGACTCCTCGGCGCAGTCGGATCGAGCCTCGCCAGCCTAATCGTTCTATCCGAGCAGCTCAACCTCAACCGCCGCGTCTCCTACCGGTACACCATCGTGGACGGCGGCGATGGCGATCCCGTAGAGAAGTGCGTCGTTTGCCAGAGCAAGTTCAGGGATGGGGACCAGGTTCGACGGCTGCCGTGCCGCCACGTGTTCCATCGGTGCTGCTTCGACGGCTGGCTGGACCACCTCAACTTCAACTGCGCTCTCTGTCGGTCGCCGCTGTTCTCCGACAAGCGCGTGGCCCTCGCCGAGCGGCGCGTCGGTGCCGAGCTCGTTTCCTGGTTCTCCTTGCGGTGA 507 0.6114 MGLQNQLNDVASDSIPLLLLTLVANCVSHIRSLLLGFLQSLGLSRFDPNPVVVDDGLLGAVGSSLASLIVLSEQLNLNRRVSYRYTIVDGGDGDPVEKCVVCQSKFRDGDQVRRLPCRHVFHRCCFDGWLDHLNFNCALCRSPLFSDKRVALAERRVGAELVSWFSLR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0625 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 88 149 - -
Bisa11g0625 168 Pfam Ring finger domain 98 141 IPR001841 -
Bisa11g0625 168 SMART ring_2 99 140 IPR001841 -
Bisa11g0625 168 SUPERFAMILY RING/U-box 98 147 - -
Bisa11g0625 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 150 IPR013083 -
Bisa11g0625 168 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0625 Bisa-ChrBisa11 17266055 17266561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0625 1 168 C3H Transcription Factor Family AT1G15100 50.595 4.16e-46 146