Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0595 ATGGGGGATCACTTTGTATTGCTGGTCGATAGGTTGCTTACTGAATCCACACTGGAAGCTGCGCTTGAAAGCCAAAATCGATCATCTGAGGCTGCACTTTCAGCAATGACAGACACCGATATTGTTGATGACTCTTCAATGAGGATAGGCCTGGAAAACACGAGATGTCAGGGGAAACTGGTGCAATGCAGGATTTGCCATGATGAGGATGAAGTTTCCAATATGGAGACACCATGCTCTTGTTGTGGTAGTTTGAAGTATGCCCACCGCAGATGCATACAAAGGTGGTGTAACGAGAAGGGAAACATCAAATGTGAGATATGTCTCCAGCAATATAAGCCTGGTTATACTGCTCCTCCTGCGCTATTTCGATTTGGGCGCATTCCAATGAATTTCAGGGGAAATTGGGAGATATCAAGAAGAGACTTGCATGGTACTACTCAAATTGTTCATATGGTCTCACCGGACCCGAATTTTACCAGTCCTAACTATGAACAGTATTCAGCTTCTATTGTCTTCTGTTCAGTTGCAGTCGTTTTCACGATTCTTCTGACACTGGGACATTCCCTTCCCCTTCTCGAAATGATTGAAGACATGGAGTATTCTATCCCTCTCTTGACGTTGTTACTGATTCGTTGTGCGGGACTTGTTCTGCCTGTATATGCCATGGTGAGAGCTGTGACATTCATGCTGCGGCGTCGGCAACCACAACGGGGGCCTCCTAATGCATCCGGCAATCAATCTGACAACGAAAACAGGCAATCAGCTTCGCAGCCTCAACCCCAGACCCGTGTCGTCGGTATCACTTTCCCAATCGCTGGGAGGGAGGGATACATGGTTGCAGAGTGTGCAAAGGGGTCCTCATAA 867 0.4706 MGDHFVLLVDRLLTESTLEAALESQNRSSEAALSAMTDTDIVDDSSMRIGLENTRCQGKLVQCRICHDEDEVSNMETPCSCCGSLKYAHRRCIQRWCNEKGNIKCEICLQQYKPGYTAPPALFRFGRIPMNFRGNWEISRRDLHGTTQIVHMVSPDPNFTSPNYEQYSASIVFCSVAVVFTILLTLGHSLPLLEMIEDMEYSIPLLTLLLIRCAGLVLPVYAMVRAVTFMLRRRQPQRGPPNASGNQSDNENRQSASQPQPQTRVVGITFPIAGREGYMVAECAKGSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0595 288 SMART ringv_2 62 109 IPR011016 GO:0008270
Bisa11g0595 288 MobiDBLite consensus disorder prediction 239 262 - -
Bisa11g0595 288 CDD RING_CH-C4HC3_MARCH 63 108 - -
Bisa11g0595 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 118 IPR013083 -
Bisa11g0595 288 MobiDBLite consensus disorder prediction 235 262 - -
Bisa11g0595 288 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 237 IPR033275 -
Bisa11g0595 288 Pfam RING-variant domain 63 108 IPR011016 GO:0008270
Bisa11g0595 288 FunFam Zinc finger family protein 51 118 - -
Bisa11g0595 288 Pfam Protein of unknown function (DUF3675) 114 227 IPR022143 -
Bisa11g0595 288 ProSiteProfiles Zinc finger RING-CH-type profile. 55 115 IPR011016 GO:0008270
Bisa11g0595 288 SUPERFAMILY RING/U-box 61 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0595 Bisa-ChrBisa11 16557429 16560208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0595 62 108 C3H Transcription Factor Family AT2G37950 46.000 2.34e-06 45.8