Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0590 ATGGCAGCATCCTTCATTTATATTCCAATTTTACTAGTGTTGTTGTGGCATGCCTTTTCCTTGTTCCACGATGCTACTGTTAATGCTGTACTTAAGGAGGAGGTAGAAGCTTTGCATCAGTTGCAGTGGAATCGTTGTAGTGATGACCCCAACCCATGCTCCTGGGATGGTATTGTATGCAATAATGGCAGCATTATTGAGATTCGGTCAAGAGACTTAGTCTTCTTAGAACTTTCCAGCAATCTCCTCACTGGTCCAATCCCTGAAGAAATTGGGAGGTTAAAGAATTTGACCTTCATAAACCTTAGAAATAACACATTGACTGGTCCAATTCCTCAAGAAATTGGGAGGTTAGAAAGTTTGAGAACCATAGACCTTAGCCATAACCAACTAATTGGTCAAATTCCATGGTCCAGTCTAGGATATTTGGCATTCTTAGAACATTTGTTGCTTAGTTTTAATCAACTGAATGGTTCCATTCCTTTGGAAATAGGAAGTTTAACTAGTTTGAATCTTCTAGACCTTGCTGCAAATCATTTCCATGATGCAATTCCTTCGTCTTTAAGCATTCCTCCTCAAGTTGGCACTCTTTCTAGTGTTGTGAGCATTGACCTCAGTCATAACTTAATCATTGGAGATTTACCTCCTCAATTGGGAAACTTATCGGATTATGTAATTTTGGATTTAAGCTACAATAATCTCACTGGAACTATACCAAAAGAACTTGTCAATATGATGGGTCACATCAATTTATCATACAATTCACTCTCTGGATTTGTCCCATTTTGTTATTCTCAAGATGTTATTATTGGTAATAAGGGAATAATTGGTCCACAAAGAAATCTTACTTGTTCTAACTCTTCACGCTCCGAAGTTGATCATAAGGGAATAATTGGTCCACATAAGGGAATAATTGTTCCACAAAGAAATCTTACTTGTTCTAACTCTTCATGCTCTGAAGTTGAGCATAAGGGAATAATTGGTCCACAACCACAAGGAAATAATTACCTTAAGATTATTCTTCCCATCACAAGTATCTTTGTCATCATGCTTGTCGGGGCTTGGCTAGCCTTTCGATTCAAGATCAAGAAAACCAAATTTGTGGAAAGAGCACCTCCAAAGAGTGGAGATTTGTTCTCAATATGGAACTTTGATGGTAAAATTGCATATGAAGATATCATTGGAGCAACAGAGGACTTTGACATAAAGTATTGCATTGGAACAGGTGCTTACGGTAGTGTCTATAGAGCACAACTTCCCAGTGGCAAAATTGTTGCATTAAAGAAACTTCACAAAACGGAATCTGAAAACCCAAATTTTGCAAGGAGTTTTAGCAATGAGGTAAGAATGTTGACAAAAATTCGTCATAGAAACATTATCAAACTTTATGGTTTTTGTTTGCACAATAAGTGCATGTTTCTGGTTTATGAATACATGGAAAGGGGAAGCTTATTTTGTGCATTGAGCAATGATGTAGAGGCTGAGGAACTTAATTGGGAACAAAGAGTGAACATCATCAAAGGAATAGCACGTGCATTGTCTTACATGCATCATGATTGTATTCCAACAATTATTCATCGAGATATAACTACAAGTAATATCTTGTTGAATGAAAGGATGGAGGCTATTGTATCAGATTTTGGAACAGCAAGAGTTCTCGATCCAGATTCCTCTAATCAAACACTATTGGTTGGCACCTATGGATATATCGCACCGGAATTGGCATACACATTAATGGTGACTGAAAAATGTGATGTTTATGGTTTTGGTGTGGTTGTATTAGAAACAATAATGGGAAGACATCCAGGAGAGCTAGTTTCGTCTTTATCAAAACCAGGTCCTCAAAACATGATGCTAAAAGATATGCTAGACCCTCGCTTACCTCTTCCCATCTTGAAAAATGATGCAAGAAATGTGGTTCTTGCAATCACAATAGCATTGGAATGTCTTCGTTCCCAACCAAAGGCACGCCCGTCAATGCAACAAGTGTTTCAAGAACTATCAGCTTGCAGGCCTCCTCTGCTTTTTCCCTTTAATGATATTTCAATCCAACAACTGATGAATCAAGATATATATGTTGTAGATGAAGTAAGTGAAGCATAA 2103 0.3757 MAASFIYIPILLVLLWHAFSLFHDATVNAVLKEEVEALHQLQWNRCSDDPNPCSWDGIVCNNGSIIEIRSRDLVFLELSSNLLTGPIPEEIGRLKNLTFINLRNNTLTGPIPQEIGRLESLRTIDLSHNQLIGQIPWSSLGYLAFLEHLLLSFNQLNGSIPLEIGSLTSLNLLDLAANHFHDAIPSSLSIPPQVGTLSSVVSIDLSHNLIIGDLPPQLGNLSDYVILDLSYNNLTGTIPKELVNMMGHINLSYNSLSGFVPFCYSQDVIIGNKGIIGPQRNLTCSNSSRSEVDHKGIIGPHKGIIVPQRNLTCSNSSCSEVEHKGIIGPQPQGNNYLKIILPITSIFVIMLVGAWLAFRFKIKKTKFVERAPPKSGDLFSIWNFDGKIAYEDIIGATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKLHKTESENPNFARSFSNEVRMLTKIRHRNIIKLYGFCLHNKCMFLVYEYMERGSLFCALSNDVEAEELNWEQRVNIIKGIARALSYMHHDCIPTIIHRDITTSNILLNERMEAIVSDFGTARVLDPDSSNQTLLVGTYGYIAPELAYTLMVTEKCDVYGFGVVVLETIMGRHPGELVSSLSKPGPQNMMLKDMLDPRLPLPILKNDARNVVLAITIALECLRSQPKARPSMQQVFQELSACRPPLLFPFNDISIQQLMNQDIYVVDEVSEA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0590 700 PANTHER LEUCINE RICH REPEAT KINASE 2 189 670 - -
Bisa11g0590 700 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Bisa11g0590 700 FunFam Leucine-rich repeat receptor protein kinase MSP1 363 478 - -
Bisa11g0590 700 Gene3D Ribonuclease Inhibitor 189 286 IPR032675 -
Bisa11g0590 700 FunFam Leucine-rich repeat receptor protein kinase EMS1 67 138 - -
Bisa11g0590 700 SUPERFAMILY Protein kinase-like (PK-like) 382 667 IPR011009 -
Bisa11g0590 700 Gene3D Transferase(Phosphotransferase) domain 1 479 673 - -
Bisa11g0590 700 ProSiteProfiles Protein kinase domain profile. 400 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0590 700 FunFam MDIS1-interacting receptor like kinase 2 479 672 - -
Bisa11g0590 700 Pfam Leucine rich repeat 76 131 IPR001611 GO:0005515
Bisa11g0590 700 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Bisa11g0590 700 Gene3D Phosphorylase Kinase; domain 1 369 478 - -
Bisa11g0590 700 Pfam Protein kinase domain 404 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0590 700 Gene3D Ribonuclease Inhibitor 29 138 IPR032675 -
Bisa11g0590 700 Gene3D Ribonuclease Inhibitor 139 188 IPR032675 -
Bisa11g0590 700 SUPERFAMILY L domain-like 46 261 - -
Bisa11g0590 700 CDD STKc_IRAK 406 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0590 Bisa-ChrBisa11 16454815 16457574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0590 69 572 Receptor kinase-like Gene Family AT4G08850 40.347 2.00e-106 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa11g0590 Pkinase 3e-47 CL0016