Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0588 ATGACAAAATTAGAGAATATTGACATTTCTTACAATCAAATGGTTGATCTTCTATCTCCTGAAATTGGAAAATTCAAAATTTTGATGAGTTTGAATTTGAGCTCTAATTTGTTAAGTGGTCCGATTCCGCCGCAAATTGAGAATATGAGCAATTTGGTTGGGCTAAGTCTAAGTAACAACATGTTGGTAGGCTCAATTCCATACAACCTAGGCAATTTGAAAAAACTAACTTTTTTGTCTTTGGCTAGAAACAATATTGATGGTTGCATTCCTTGGGAACTGGAGAATTTGAAAAGCTTAGTCTTCTTAGACCTTTCCAGAAATCTCCTCACTTGTCCAATCCCTCCAAGAATAAAAGAATTGGCATACACATTAATGGTGACTGAAAAATGTGATGTTTATAGTTTTGGTGTGGTGGTATTAGAAACAATAATGGGAAGACATCCAAGAGAGCTAGTTTCGTCTTTATCAATGCCAAGTCCTCAAAACATGATGCTAAAAGATATGTTAGACCCTCGCTTACCTCTTCCCATCTTGAAAAATGATGCAAGAGATGTGGTTCTTGCAATCACAATAGCATTAGCATGTCTTCGTTCCCAACCAAAGGCACGCCCGTCAATGCAACAAGTGTTTCAAGAACTATCAGCTCGCAAGCCTCCTCTGCTTTTTCCCTTTAATGATATTTCAATCCAACAATTGATGAATCAAGATATATATGTTGTAGATAAACTGTTCGTCAAGCCTGTACCCAACCGTCGCAGTTGTCGCCTCCGTCTCTACTCGTCAGCTCCACCTCTCGTTCGCAGCACTCTTCCTATTTCCATTTTCGATGAGGTAGCCCCACGAAACCCATTGAAGAGATCTGAAGTCGGGTAA 876 0.3916 MTKLENIDISYNQMVDLLSPEIGKFKILMSLNLSSNLLSGPIPPQIENMSNLVGLSLSNNMLVGSIPYNLGNLKKLTFLSLARNNIDGCIPWELENLKSLVFLDLSRNLLTCPIPPRIKELAYTLMVTEKCDVYSFGVVVLETIMGRHPRELVSSLSMPSPQNMMLKDMLDPRLPLPILKNDARDVVLAITIALACLRSQPKARPSMQQVFQELSARKPPLLFPFNDISIQQLMNQDIYVVDKLFVKPVPNRRSCRLRLYSSAPPLVRSTLPISIFDEVAPRNPLKRSEVG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0588 291 Pfam Protein tyrosine and serine/threonine kinase 120 214 IPR001245 GO:0004672|GO:0006468
Bisa11g0588 291 Gene3D Ribonuclease Inhibitor 1 120 IPR032675 -
Bisa11g0588 291 Gene3D Transferase(Phosphotransferase) domain 1 121 217 - -
Bisa11g0588 291 SUPERFAMILY L domain-like 2 121 - -
Bisa11g0588 291 PANTHER LEUCINE RICH REPEAT KINASE 2 2 120 - -
Bisa11g0588 291 FunFam Leucine-rich repeat receptor protein kinase EMS1 42 133 - -
Bisa11g0588 291 Pfam Leucine Rich repeats (2 copies) 74 110 IPR025875 -
Bisa11g0588 291 SUPERFAMILY Protein kinase-like (PK-like) 120 235 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0588 Bisa-ChrBisa11 16348352 16354484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0588 120 221 Receptor kinase-like Gene Family AT5G62230 27.619 4.05e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa11g0588 PK_Tyr_Ser-Thr 1e-05 CL0016