Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0586 ATGGCAGCATCCAGCATTTATATTGCAATTTTACTAGTGTTGTTGTCGCATGCCTTTGCCTTGTTCGACAGTGCTACTGTTAATGATGTACTTAAGGAGGAGGCAGAAGCTTTGCATCAGTTGCAATGGAATCGTTGTAGTGATGACCCCAACCCATGCTCCTGGGATGGTATTGTATGCAATAATGGTAGCATTATTGAGATTCGGACACCAGAGTTCTGTGGGACAATCCCTTTGGGTTTTATGACCAATCTCACTCATTTAAACCTGTCATTTAATTCATTCTCTGGTACAATACCTGCTTCTATTCCAATGATGACAAAGTTAGAGAATATTGACATTTCTTACAATCAAATGGAAGGTCATCTATCTCTTGAAATTGGAAAATTGAAAATTTTGTGGAGCTTGAATTTGAACTCTAATTTTTTAAATGGTCCAATTCCGCCACAAATTGGGAATATGAGCAATTTGGTTGGGCTAAGTCTAAGTAACAACAAGTTGGTAGGCTCAATTCCATACAGCCTAGGCAATTTGAAAAAATTGACTTTTTTGTCTTTGGCTAGAAACAATATTGATGGTTGCATTCCATGGGAACTGGAGAATTTGAAAAGCTTAGTCTTCTTAAACCTTTCCAGAAATCTTCTCACTTGTCAAATCCCTCCAAGAATAAAAGGTTTGATCAATTTGGTATGGTTGGATTTTAGTTGGAATGTGTTGATTGGTCCAATTCCTCAAGAAATTGGTAGGTTAAAAAGTTTGAGAACCATAGACCTTAGCCATAACCAACTAATGGGTTCCATTCCTTTGGAAATAGGAAGTTTAACCAGTTTAGATCTTCTAGACCTTTCAGCAAATCATTTCTATGGTGCAATTCCTTCGTCTTTGTATGACTTAACAAATTTGGCAAAGCTTTACCTTCATTCAAATCAAATCAATGGTTCTATAAACTCTAGAATAAGACATCTAATAAATTTGGAAATTTTAGACTTGTCATATAATAAAATATTTGGAAGTATACCACTTGAAATAGTACAAAACATCTTTCTTCAAACTCTAAACCTTTCCTACAACAAATTAGATAGAAGCATTCCTCCTCAAGTTGGCAATCTTTCTCATCTAATTAATTTGGATTTGAGCCACAATAATCTCACTGGAAGTGTACCGATAGAACTTATCTATATAAGTTTCATCAATTTGTCATACAATTCACTCTCTGGCCTTGTCCCATTTTGTTATTCTCAAGATGTTATTATTGGTAATAAGGGAATAATTGGTCCACAAAGGGATCTTGCTTGTTCTATCACTTCAGGCTCCAAAGTTGATCATAAGGGAATAATTGGTCCACAAGGGAATAATAATTACCTTAAGATCGTTCTTCCCCTCACAAGTATCTTTGTCATCATGCTTATTGGGGCTTGTCTAGCCTTTCAATTCAGGACCAAGAAAACCAAATTTGTGGAAAGAGCGCCTCCAAAGAGTGAAGATTTGTTCTCAGTATGGAACTTTGATGGTAAAATTGCATATGAAGATATCATTGGAGCAACAGAGGACTTTGATATGAAGTATTGCATTGGAACAGATTTTGGCACAGCAAGAGTTATTGATCCCGATTCCTCTAATCAAACTCTATTGGTTGGCACCTATGGATATATCGCCCCAGAACTGGCATACACATTAATGGTGACTGAAAAATGTGATGTTTACAGTTTTGGTGTGGTGGTATTAGAAATAATAATGGGAAGACATCCAAGAGAGATAGTTTCATCTTTATCAAAGCCAGGTCCTCAAAACATGATGCTAAAAGATGTGCTAGATCCTCGCTTACCTCTTCCCATCTTGAAAAATGATGCACAAGATGTAGTTCTTGTAGTCACAATAGCATTGGCATGTCTTCGCTCCCAACCAAAGGCTCGTCCATCAATGCATCAAGTGTTTCAAGAACTATCAGCTTGCAAGCCTCCTTTGCTTTTTCCTTTTAATGATATTTCAATCCAACAATTGATGAATCAAGATATATATGTTGTGGATAAAGTAAGCGAAGCATAA 2046 0.3641 MAASSIYIAILLVLLSHAFALFDSATVNDVLKEEAEALHQLQWNRCSDDPNPCSWDGIVCNNGSIIEIRTPEFCGTIPLGFMTNLTHLNLSFNSFSGTIPASIPMMTKLENIDISYNQMEGHLSLEIGKLKILWSLNLNSNFLNGPIPPQIGNMSNLVGLSLSNNKLVGSIPYSLGNLKKLTFLSLARNNIDGCIPWELENLKSLVFLNLSRNLLTCQIPPRIKGLINLVWLDFSWNVLIGPIPQEIGRLKSLRTIDLSHNQLMGSIPLEIGSLTSLDLLDLSANHFYGAIPSSLYDLTNLAKLYLHSNQINGSINSRIRHLINLEILDLSYNKIFGSIPLEIVQNIFLQTLNLSYNKLDRSIPPQVGNLSHLINLDLSHNNLTGSVPIELIYISFINLSYNSLSGLVPFCYSQDVIIGNKGIIGPQRDLACSITSGSKVDHKGIIGPQGNNNYLKIVLPLTSIFVIMLIGACLAFQFRTKKTKFVERAPPKSEDLFSVWNFDGKIAYEDIIGATEDFDMKYCIGTDFGTARVIDPDSSNQTLLVGTYGYIAPELAYTLMVTEKCDVYSFGVVVLEIIMGRHPREIVSSLSKPGPQNMMLKDVLDPRLPLPILKNDAQDVVLVVTIALACLRSQPKARPSMHQVFQELSACKPPLLFPFNDISIQQLMNQDIYVVDKVSEA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0586 681 Gene3D Ribonuclease Inhibitor 69 314 IPR032675 -
Bisa11g0586 681 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 228 526 - -
Bisa11g0586 681 FunFam Leucine-rich repeat receptor protein kinase EMS1 245 323 - -
Bisa11g0586 681 Gene3D Transferase(Phosphotransferase) domain 1 508 654 - -
Bisa11g0586 681 Pfam Leucine rich repeat 276 335 IPR001611 GO:0005515
Bisa11g0586 681 Gene3D Ribonuclease Inhibitor 315 434 IPR032675 -
Bisa11g0586 681 SMART LRR_sd22_2 178 204 - -
Bisa11g0586 681 SMART LRR_sd22_2 370 391 - -
Bisa11g0586 681 SMART LRR_sd22_2 322 349 - -
Bisa11g0586 681 SMART LRR_sd22_2 250 271 - -
Bisa11g0586 681 SMART LRR_sd22_2 82 114 - -
Bisa11g0586 681 SMART LRR_sd22_2 298 313 - -
Bisa11g0586 681 SMART LRR_typ_2 82 106 IPR003591 -
Bisa11g0586 681 SMART LRR_typ_2 349 370 IPR003591 -
Bisa11g0586 681 SMART LRR_typ_2 202 225 IPR003591 -
Bisa11g0586 681 SMART LRR_typ_2 298 321 IPR003591 -
Bisa11g0586 681 SMART LRR_typ_2 154 178 IPR003591 -
Bisa11g0586 681 SMART LRR_typ_2 250 274 IPR003591 -
Bisa11g0586 681 SMART LRR_typ_2 322 346 IPR003591 -
Bisa11g0586 681 PRINTS Leucine-rich repeat signature 253 266 - -
Bisa11g0586 681 PRINTS Leucine-rich repeat signature 322 335 - -
Bisa11g0586 681 FunFam Leucine-rich repeat receptor protein kinase EMS1 324 411 - -
Bisa11g0586 681 SUPERFAMILY L domain-like 59 411 - -
Bisa11g0586 681 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 56 244 - -
Bisa11g0586 681 ProSiteProfiles Protein kinase domain profile. 325 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0586 681 Pfam Protein kinase domain 526 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0586 681 SUPERFAMILY Protein kinase-like (PK-like) 526 669 IPR011009 -
Bisa11g0586 681 SMART serkin_6 428 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0586 681 Pfam Leucine Rich Repeat 84 103 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0586 Bisa-ChrBisa11 16214045 16217079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0586 516 553 Receptor kinase-like Gene Family AT4G08850 52.632 5.78e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa11g0586 Pkinase 2.9e-12 CL0016