Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0585 ATGACAAGGTTAGCGAATATTGATATTTCTTACAATCGAATGGGTGGTTTTATATCTCTTGAAATTAGAAAATTGAAAATTTTGTTGAGTTTCAAGTTGAGCTCTAATTTTTTAATTGGTCCAATTCCTCCACAAATTGGACTAAATCTAAGTAACAACAAGTTGGAAGGCTCAGTTCCTCAAAGCATAGGCAGATTGGAAAGGCTAACCAACATAGACCTTGGTTATAACAACATCAGCGGTCAAATCCCATCCAGCCTAGGAAATTTGAAAATTTTGACTTATTTGTCTCTAGCTCAAAACAATATCAGTGGCTGCATACCTCCAGTAATAAAAGGTTTGATCAATTTGGTAAGCTTAGATCTTAGTTGGAACAAATTGATTGGTCCAATTCCTCAAGAAATTGGGAGGTTAAAGACTATGACCTACATAGACCTTGGCCGTAACAAACTTGTTGGTCAAATTCCTTCGTCTTTGTATGACTTAACAAATTTGAAAGAGCTTTACCTTAATTCAAATCAAATCAGGAATCTGACTTTTTCTAACACTTCACACTCCAAAGTTGATCATAATTACCTTAAGATCATTCTTCCCATCACAAGTATCTTTGTCATCATGCTTGTTGGGGCTTGGCTAGCCTTTCGAATCAAGACCAAGAAAACCAAATTTGTGGAAAGAGCACCTCCAAAGAGTGGAGATTTGTTCTCAATAGGGAACTTTGATGGTAAAATTGCATATGAAGATATCATTGGAGCAACAGAGGACTTTGATATAAAGTATTGCATTGGAACAGGTGCTTATGGTAGTGTCTATAGAGCACAACTTCCTAGTGGCAAAATTGTTGCATTGAAGAAAGTTCACAAAATGGAATCTCAAAACCCAAATTTTGCTAGGAGTTTTAGCAATGAGGTAAAAATGTTGACAAAAATTTGTCATAGAAACATTGTCAAACTTCATGGGTTTTGTCCACACAATAAGTGTATGTTTCTGGTCTATGAATACATGGAAAGGGGAAGCTTATTTTGTGCATTGAGCAATGATGTAGAGGCTGAAGAATTGAATTGGGAACGAAGAGTCAACATTGTCAAAGGAATAGCATAATTGGCATACACATTAATGGTGACTGAAAAATGTGATGTTTATAGTTTTGGTGTGGTTGTATTAGAAACAATAATGGGAAGACATCCAGGAGAGCTATTTTCATTTTTATCAAAGCCAGGTCCTCAAAACATGATGCTAAAAGATGCACTAGACCCTCGCTTACCTCTTCCCATCTTGAAAAATGATGCACAAGATGTGGTTCTTGCAGTCACAACAGCATTGGCATGTCTTCGTTCCCAACCAAAGGGATGTCCATCAATGCAACAACTGTTTCAAGAACTATCAGCTTGCAAGCCTACTTTGCCTTATCCAACAACTGATGAATCAAGATATATATGTTGTAGATAA 1449 0.3644 MTRLANIDISYNRMGGFISLEIRKLKILLSFKLSSNFLIGPIPPQIGLNLSNNKLEGSVPQSIGRLERLTNIDLGYNNISGQIPSSLGNLKILTYLSLAQNNISGCIPPVIKGLINLVSLDLSWNKLIGPIPQEIGRLKTMTYIDLGRNKLVGQIPSSLYDLTNLKELYLNSNQIRNLTFSNTSHSKVDHNYLKIILPITSIFVIMLVGAWLAFRIKTKKTKFVERAPPKSGDLFSIGNFDGKIAYEDIIGATEDFDIKYCIGTGAYGSVYRAQLPSGKIVALKKVHKMESQNPNFARSFSNEVKMLTKICHRNIVKLHGFCPHNKCMFLVYEYMERGSLFCALSNDVEAEELNWERRVNIVKGIAXLAYTLMVTEKCDVYSFGVVVLETIMGRHPGELFSFLSKPGPQNMMLKDALDPRLPLPILKNDAQDVVLAVTTALACLRSQPKGCPSMQQLFQELSACKPTLPYPTTDESRYICCR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0585 482 PANTHER LEUCINE RICH REPEAT KINASE 2 2 366 - -
Bisa11g0585 482 ProSiteProfiles Protein kinase domain profile. 256 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0585 482 SUPERFAMILY L domain-like 2 181 - -
Bisa11g0585 482 Gene3D Transferase(Phosphotransferase) domain 1 367 469 - -
Bisa11g0585 482 Gene3D Ribonuclease Inhibitor 1 82 IPR032675 -
Bisa11g0585 482 Pfam Protein kinase domain 260 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa11g0585 482 Gene3D Ribonuclease Inhibitor 83 198 IPR032675 -
Bisa11g0585 482 FunFam Leucine-rich repeat receptor protein kinase MSP1 218 334 - -
Bisa11g0585 482 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Bisa11g0585 482 Gene3D Phosphorylase Kinase; domain 1 220 334 - -
Bisa11g0585 482 ProSiteProfiles Leucine-rich repeat profile. 164 185 IPR001611 GO:0005515
Bisa11g0585 482 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 178 - -
Bisa11g0585 482 SUPERFAMILY Protein kinase-like (PK-like) 240 471 IPR011009 -
Bisa11g0585 482 SMART LRR_typ_2 162 186 IPR003591 -
Bisa11g0585 482 SMART LRR_typ_2 114 138 IPR003591 -
Bisa11g0585 482 SMART LRR_typ_2 66 90 IPR003591 -
Bisa11g0585 482 Pfam Leucine rich repeat 68 127 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0585 Bisa-ChrBisa11 16166071 16168153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0585 7 370 Receptor kinase-like Gene Family AT4G08850 35.927 5.22e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa11g0585 Pkinase 2.7e-16 CL0016