Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0558 ATGAGGAAGCCTTGCTGTGAAAAGCAAGACATGAACAAAGGCGCTTGGTCCAAACAAGAAGATCAGAAACTCATTGATTACATCAACAAACATGGCGAGGGATGCTGGCGTACTCTCCCTCAAGCTGCAGGCTTACTTCGGTGCGGTAAAAGTTGTAGGCTGAGATGGATAAACTATCTAAGGCCAGACCTCAAAAGAGGAAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCACTCTTAGGCAATCGTTGGTCTTTGATAGCTGGAAGATTACCTGGGCGAACAGATAATGAAGTGAAAAACTATTGGAACTCCCATCTAAGAAGAAAGCTCATCAACATGGGAATTGATCCAAACAATCATAGATTGACTCACAAATTCCCTCCCTTTCAAAATCCAAGCACGTCCGGAAGCTCTGCATCATCTGGCTTGAAAGACAATCACAATATTATTGCCAAGAACATTCATGATAATGAGCCAACAATAAAACCTCAAATTGGTCTTTCTGACCTTAACCATGAACAAGCTTCAGATTCTGCAAGTGGCTTGGAAGATGAGTCCAATGGTGGTGTGCCTGATTTGAACCTCGATCTCACAATGAGCATTCCTTCTTCTTCACCTATAATACCTACTAGTGCTGCAAATGGAGACACCCAAAAGCCAATTCACCATGAATCTAAATCATCAAGGGAAATGCATTTTGCTAATTCCTCTACAACACTACTTCTGTTTCAGTGA 750 0.4173 MRKPCCEKQDMNKGAWSKQEDQKLIDYINKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINMGIDPNNHRLTHKFPPFQNPSTSGSSASSGLKDNHNIIAKNIHDNEPTIKPQIGLSDLNHEQASDSASGLEDESNGGVPDLNLDLTMSIPSSSPIIPTSAANGDTQKPIHHESKSSREMHFANSSTTLLLFQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0558 249 FunFam MYB transcription factor 67 128 - -
Bisa11g0558 249 MobiDBLite consensus disorder prediction 124 149 - -
Bisa11g0558 249 MobiDBLite consensus disorder prediction 202 223 - -
Bisa11g0558 249 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 186 - -
Bisa11g0558 249 CDD SANT 68 111 IPR001005 -
Bisa11g0558 249 CDD SANT 15 60 IPR001005 -
Bisa11g0558 249 Gene3D - 68 131 - -
Bisa11g0558 249 SMART sant 65 113 IPR001005 -
Bisa11g0558 249 SMART sant 12 62 IPR001005 -
Bisa11g0558 249 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bisa11g0558 249 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bisa11g0558 249 MobiDBLite consensus disorder prediction 177 233 - -
Bisa11g0558 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bisa11g0558 249 Gene3D - 13 65 - -
Bisa11g0558 249 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa11g0558 249 MobiDBLite consensus disorder prediction 129 149 - -
Bisa11g0558 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bisa11g0558 249 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bisa11g0558 249 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bisa11g0558 249 FunFam MYB-related transcription factor 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0558 Bisa-ChrBisa11 15331987 15334413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0558 2 207 MYB Transcription Factor Family AT4G38620 55.556 4.92e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa11g0558 Myb_DNA-binding 1.6e-14 CL0123