Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0544 ATGGCTATGATGGCTTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACGCGGATGGACTCATGATGTGTTCTTGAGTTTCAGAGGCGAAGATACCAGAAGAAGTTTCACAGGCTTTCTGTACCATGCTTTGTGTCAAAGGGGGATTAATGCATTCATAGATGATGAGAAGCTCAAGAGAGGGGATGCCATATCCCCATCTCTTCTCAGAGCAATCGAAGAGTCTCAGATTTCTATCATAGTATTCTCCGAAAACTATGCTTCTTCCACATGGTGTCTTGATGAGCTTCTCAAGATCCTCGATTGTATGAAAACGAAGGGCCAATGGGTTTGGCCAGTTTTCTATAACGTAGACCCTTCAGTGGTACGCCATCAAAGAGCAAGTTTTGGCATAGCAATGGCTAAGCATGAAGCCAGATTCAAGAATGACTTGGAAAAGGTGCACCAGTGGAACAGGGCTTTGTTTGAAGCAGCCAACTTGTCTGGTTGGAGCTTAGAAAATGGGTATGAATTTGAGCTTATCCAAAAGATTGTTGAAGAGGTCTGTGGCAAGGTAGATCACACTCCTTTGCACATTGCTGAATATCCAGTTGGCTTAGAGACTCGCATATCAGAAGTAAAATCGCTTTTGCATATTGGGCCTGATGAAGATAGTCGCATGGTGGGAATCTATGGACTTGGAGATATAGCATGCTTCTTTAAAGGGGAGACACTAGAATATGTTCAAAAGACATTAAAAGCTTGTGGCTTCTATCCAAAATTTGGTATAAGTGTACTTATCGATAGATCTCTTATAAGTATTGATGAGTATAACAGATTGAGAATGCATGATCTAATACAAGACATGGGTAGAGAAGTTGTAAGAGAAGATTCACCATTAGATCCCGGAAATCGAAGCAGATTATGGCACTATGAAGATGTTTTTGAAGTACTCACTGAAAATACAGGGTCAAATAAAATTCAAGGCATGATGGTGGACCTCCCAAATGAATATACGGTACACTTGAGAGCAAACACCTTCAAAATGATGAAAAATCTGAAAATTCTTATAGTTCGACATGCACACATTTCTGGAAACCTCCAACACCTTCCTAACAATTTAAGATTGCTTGATTGGATGGAATATCCTTCATCATCTCTACCATTCAATTTTCATCCCAGGAAACTTGTTGTACTCAACTTATCAAGTAGTCGTTTTACAATGCGGGAGCCATTTAAGTATTTGGACTCCTTAACTTCTATGGATTTGAGCCATTGTGAACTCTTAACAAAACTACCTGACATTTCTGGGGTTCCAAATTTGACAGAACTAAACCTTGATTTCTGTACAAATTTAGAAGAAGTTCATGATTCTGTTGGATTTCTTGAGAAACTTGTAGAGTTGAGGGCTTATGGATGTACCAAACTAAGGGTATTTCCATGTGCCATTAGCTTAACATCACTCAGAAGTCTGATTCTGAATTGGTGCTCAAGTCTTCGGAGGTTCCCAGATATCCTAGGGAAAATGGAAAGTCTAATATCCATTTCCATTGAAGGTAGTGGTATAGAAAAATTGCCTACTTCCATTGGAAACCTTGTTGGGCTTCAAGAAATAAGTATGACATCTTGCTTAAATCTAAAGGGACTTCCAGAAAGTATTGACTTGCTGCAAAATTTGAGAAGTCTTGATATTGAGGGTTGTCCACAACTCAGAAATTTTTTTGAAAAGTTGAAGGGTATGGGACAACATATTCATACCTTTGATAATGTACATTCATTGAATCTAGAAAGCTGTGGTTTATTGGATGAAGATCTTCCCATAATTTTAAACTCTTTTCCAAAGTTGGCTTTATTAGTCCTTTCAGGAAACAACTTTGTAAACCTTCCATCTTGCGTACAAGATTTTCTTGATTTGCAGTTACTTCACTTGGACAATTGCAAGCAACTCCAAGAAATTCCAGGCCTTCCACCCAATTTACAATACATCAATGCAAGAAATTGCACATCATTAAATGTAGAGTCCTCAAGCTTATTGTTGAGTCAGGAAACCTTTCAAGTGTATGAGTTACAAGTTATGGTGCCAGGAACAAGGATTCCAGTGTGGTTTGACTTGTGCAGCAAAGGAGAATATATAACATTTTGGGTTCATAAAAAATTTCCAGTGTTTACTCTATGCTATGTTTTAGCAGTAGGGAGTGAAATGAACGAGTTTTTTAGTTGTCAAATTCAGTTCTTCATCAATGGTGAAGAATTGTTTGAATTGGAAATTTCAAGAGGTTTTGCAGCAATAGTGACAAATCACGTTTGGTTGTATGATTTACGAACCCATCCATCCATCCAGTGGCATAGTCTTGATTCATATATGGAGAATGAATGGAATCAGGTTGAGATTTCATGTGAGAAACTATCTAAAGCACCAAATGTTACTGTAAGCTGGTGTGGTATTCATGTATGCAGGCAAGAAGCAAGCATGGAGGATATCTTATTTACAGCACCTGATCTTGAATCAGATTCAATAACAGAATCTGATAACTCTGAGTTTGAGCCTGAATTAAAGATACTTATTAGTGAAGACATGGACAAGTCAGTGGAAGATTTTCAATTGTTTAACAAAAGTGAAGATGATTGCTACATTGTTAATGATAGCTTGGTAAGTTGTGAGCTACAGGAAAGGAAATTGCAATGTTCAGGAAATCAGACGAATCAACTGCTAGATGATGAAGAAATGGAAGCATTTTATGCTTCTCTGGATGTTGAGACTTCTGTTCTATTACCTTTCAAGGATATCACAGCCATTCCTGAACTGGCAAAGACTAAGGTAAGTGAAGAAACCCAGAAAGCATTGAAGACATTTCAAGACTTTCTCACTAAAGATTTTTCTGACATATTGGAGCCTAAAGAGTATAGTACCATGAAAGCTACCTTAGATTACCTCTCTGGATTATCTAGGGATGATGGAATCTCAGTAGAAATGAGGTTAGTGATAATGGAAGTTTCAAGAGAATTCACTCATTGGAGTTGGGATTATAGCAATGCAAGCAAGAAAATAGAGATAATGAAAGCTAGCACGTTGAAAGCAGATGAAATAAAAGAGGGTCTTGAAGCAAACATGAACCATTTCAGGCAAGTCGTGTCCTTGGAAAATGAGTTGCATAGCCAGTTGACCTATTTGGAGGAAAGAAAGAAAGAGTTGGAAACGCAAATCAATGCCATTAAAGCTAACATCTCTTCTTCTGAATCAACCAAGAATATGATTGTTGATAGAAAGAGAGAAATCTTTGAGGAAGGAAAGATGCTCAAAGCTCAAAGAGATGAGTTGAGGGAACAAGTGCCACACTTATTAGATGAGTGTGAATTGGCAAAGAAGATCCAAGCAAACATCAGAGCTGTATGGTCAAAACTTGTAGAAAAATTAAACAATAATTAA 3414 0.3776 MAMMASLSSSSSSSSSSSSRGWTHDVFLSFRGEDTRRSFTGFLYHALCQRGINAFIDDEKLKRGDAISPSLLRAIEESQISIIVFSENYASSTWCLDELLKILDCMKTKGQWVWPVFYNVDPSVVRHQRASFGIAMAKHEARFKNDLEKVHQWNRALFEAANLSGWSLENGYEFELIQKIVEEVCGKVDHTPLHIAEYPVGLETRISEVKSLLHIGPDEDSRMVGIYGLGDIACFFKGETLEYVQKTLKACGFYPKFGISVLIDRSLISIDEYNRLRMHDLIQDMGREVVREDSPLDPGNRSRLWHYEDVFEVLTENTGSNKIQGMMVDLPNEYTVHLRANTFKMMKNLKILIVRHAHISGNLQHLPNNLRLLDWMEYPSSSLPFNFHPRKLVVLNLSSSRFTMREPFKYLDSLTSMDLSHCELLTKLPDISGVPNLTELNLDFCTNLEEVHDSVGFLEKLVELRAYGCTKLRVFPCAISLTSLRSLILNWCSSLRRFPDILGKMESLISISIEGSGIEKLPTSIGNLVGLQEISMTSCLNLKGLPESIDLLQNLRSLDIEGCPQLRNFFEKLKGMGQHIHTFDNVHSLNLESCGLLDEDLPIILNSFPKLALLVLSGNNFVNLPSCVQDFLDLQLLHLDNCKQLQEIPGLPPNLQYINARNCTSLNVESSSLLLSQETFQVYELQVMVPGTRIPVWFDLCSKGEYITFWVHKKFPVFTLCYVLAVGSEMNEFFSCQIQFFINGEELFELEISRGFAAIVTNHVWLYDLRTHPSIQWHSLDSYMENEWNQVEISCEKLSKAPNVTVSWCGIHVCRQEASMEDILFTAPDLESDSITESDNSEFEPELKILISEDMDKSVEDFQLFNKSEDDCYIVNDSLVSCELQERKLQCSGNQTNQLLDDEEMEAFYASLDVETSVLLPFKDITAIPELAKTKVSEETQKALKTFQDFLTKDFSDILEPKEYSTMKATLDYLSGLSRDDGISVEMRLVIMEVSREFTHWSWDYSNASKKIEIMKASTLKADEIKEGLEANMNHFRQVVSLENELHSQLTYLEERKKELETQINAIKANISSSESTKNMIVDRKREIFEEGKMLKAQRDELREQVPHLLDECELAKKIQANIRAVWSKLVEKLNNN 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0544 1137 Gene3D Ribonuclease Inhibitor 494 682 IPR032675 -
Bisa11g0544 1137 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Bisa11g0544 1137 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 166 IPR035897 -
Bisa11g0544 1137 Gene3D - 17 196 IPR035897 -
Bisa11g0544 1137 Gene3D Ribonuclease Inhibitor 314 493 IPR032675 -
Bisa11g0544 1137 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 232 IPR044974 GO:0006952
Bisa11g0544 1137 SUPERFAMILY "Winged helix" DNA-binding domain 231 314 IPR036390 -
Bisa11g0544 1137 Coils Coil 1043 1077 - -
Bisa11g0544 1137 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g0544 1137 Pfam TIR domain 24 188 IPR000157 GO:0007165
Bisa11g0544 1137 Coils Coil 1085 1105 - -
Bisa11g0544 1137 SUPERFAMILY L domain-like 325 678 - -
Bisa11g0544 1137 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Bisa11g0544 1137 SMART till_3 23 163 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0544 Bisa-ChrBisa11 14855387 14862593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0544 231 576 WRKY Transcription Factor Family AT4G12020 36.712 2.47e-53 203