Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0538 ATGGAGGAGGCTGGTAAGGAGTGGTCGTCTTCATCATCATCATTGTCATCTTCATCGTACTATAGCATTCTTGGTGTTAGCTGGGATTCTTCCTTTGAAGAAATTAGGCGTGCTTATCGCAAGCTTGCTCTGCTATGGCATCCTGATAGGTGGACAAGAACGCCCTCTTTATTGGGTGAAGCCAAACGAAAATTTCAGCAGATTCAAGAAGCTTATTCAGTACTATCAGACCAAAAGAAAAGAAGGGTGTACGATGCAGGCATGTATGATCCTCAAGACGAAGAAGATGAGGGTTTCTCTGACTTTGTGGAAGAAATGGTGTCACTGATGGCTCAAGTGAGAAAGGAGGAAAAGGAATACAGTATGGAGGAGTTGCAGAGTATGCTGAGTGAAATGGCTCATGAATTCAAGTTGGATGAGTGGGGGTCAGCTTCATGCAATTACGGACCCTGTGTTCTTGATCAGTCCCAGGTCTCCAAGACGATGATGCATTTGGACACAGACGTCATGTGA 513 0.4483 MEEAGKEWSSSSSSLSSSSYYSILGVSWDSSFEEIRRAYRKLALLWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDQKKRRVYDAGMYDPQDEEDEGFSDFVEEMVSLMAQVRKEEKEYSMEELQSMLSEMAHEFKLDEWGSASCNYGPCVLDQSQVSKTMMHLDTDVM 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0538 170 PANTHER PUTATIVE, EXPRESSED-RELATED 13 138 - -
Bisa11g0538 170 Gene3D DnaJ domain 4 108 IPR036869 -
Bisa11g0538 170 ProSitePatterns Nt-dnaJ domain signature. 65 84 IPR018253 -
Bisa11g0538 170 PRINTS DnaJ domain signature 39 54 IPR001623 -
Bisa11g0538 170 PRINTS DnaJ domain signature 21 39 IPR001623 -
Bisa11g0538 170 PRINTS DnaJ domain signature 80 99 IPR001623 -
Bisa11g0538 170 PRINTS DnaJ domain signature 60 80 IPR001623 -
Bisa11g0538 170 SMART dnaj_3 18 80 IPR001623 -
Bisa11g0538 170 SUPERFAMILY Chaperone J-domain 17 84 IPR036869 -
Bisa11g0538 170 CDD DnaJ 23 77 IPR001623 -
Bisa11g0538 170 ProSiteProfiles dnaJ domain profile. 19 88 IPR001623 -
Bisa11g0538 170 Pfam DnaJ domain 20 85 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0538 Bisa-ChrBisa11 14583240 14585224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0538 10 86 C2H2 Transcription Factor Family AT1G74250 44.872 3.46e-13 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0538 11 14583240 14585224 Bisa11g0538 11 14583240 14585224 ECH