Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0532 ATGTCTAGCAACGATGAGGTCCAAAGGATGGAAGAAGGTCAAAGTATCCCCCAAGGTGAAACTGGGTTTTGTAGCAATCCTTCCACAGTTCTACTCATACAAAAGGTAATTGCAGAGGCCATTGGGACATACTTCTTGGTATTTGCAGGATGCTTGTCTGTGGTTTTGAACAAAATGGATGGAACTGTGACATTTCCAGGAATCTGTATGGTTTGGGGTTTGAGTGGAATGGTCATGATTTATGCTGTGGGCCACATCTCTGGGGCCCATTTCAATCCTGCCATCACTGTGACCTTTGCTATTGTTCGACAATTTTCCTTGAAACAGGTTCCTCTGTATATTCTTGCTCAAGTGGTAGGTTCTATCCTGGCCAGTGGGACACTGTACCTTTTGTTCGATGTGGATGAAAAATTGTATTTCGGAACGGCGCCGTCTGGATCCAAAGCTCAATCTCTTGTCATAGAGATCATCGCTTCCTTTTTGTTGATGTTTGTTTGTTCTGCGGTTGCCACAGATGATCGAGCAATTGGACAATTGGCAGGTATTGCGATTGGGATGACACTTACGGTGGACTTATTCATGGCCGGGCGTGTGTCAGGAGGATCGATGAACCCAGCAAGAAGCATTGGGCCTGCAATTATAATCAACAATTATGATTCAATTTGGATTTATATGGTTGGCCCATTTTCTGGGGCCCTATTAGGTGGCTTTGCCTATGGCCTCATTAGATACACTGATAAACCTCTCAAGGAACTCCACAAAGCCCCTGCACATTTATTTTCCCTCAATACTAATCCTCAACCCTAA 807 0.4436 MSSNDEVQRMEEGQSIPQGETGFCSNPSTVLLIQKVIAEAIGTYFLVFAGCLSVVLNKMDGTVTFPGICMVWGLSGMVMIYAVGHISGAHFNPAITVTFAIVRQFSLKQVPLYILAQVVGSILASGTLYLLFDVDEKLYFGTAPSGSKAQSLVIEIIASFLLMFVCSAVATDDRAIGQLAGIAIGMTLTVDLFMAGRVSGGSMNPARSIGPAIIINNYDSIWIYMVGPFSGALLGGFAYGLIRYTDKPLKELHKAPAHLFSLNTNPQP 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0532 268 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Bisa11g0532 268 Gene3D Glycerol uptake facilitator protein. 3 253 IPR023271 -
Bisa11g0532 268 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g0532 268 Pfam Major intrinsic protein 29 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PRINTS Major intrinsic protein family signature 34 53 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 SUPERFAMILY Aquaporin-like 31 252 IPR023271 -
Bisa11g0532 268 NCBIfam MIP family channel protein 38 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 CDD MIP 34 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa11g0532 268 PANTHER AQUAPORIN NIP2-1 10 250 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0532 Bisa-ChrBisa11 14423171 14433492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0532 3 262 Major Intrinsic Protein MIP AT5G37820 59.091 4.88e-109 316